Gene Rpic12D_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3413 
Symbol 
ID8021098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3603099 
End bp3603887 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID644832207 
ProductHydroxypyruvate isomerase 
Protein accessionYP_002983349 
Protein GI241664989 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCT TTGCCGCCAA CCTGTCCATG ATGTACCAGG AGCACGCGTT CCTCGACCGC 
TTTGCCGCTG CGGCAAAGGA TGGCTTCGAG GGCGTGGAGT TCCTTTTTCC CTACGACTTC
GACAAGGCCG ATATCCGCGC CCGTCTTGAC GATACAGGTC TCACGCAGGC GCTGTTCAAT
GCGCCGCCGG GCGATTGGGC GGGCGGCGAG CGCGGCATCG CCTCGCTGCC CGGTCGCGAA
GAGGAGTTCA AGCGCGGCAT TGCGACAGCG CTCGAGTATG CGCAGGTGCT CGGCAACACG
CGTCTGCACG TGATGGCTGG CCTGCTGCCC GCGGGTGCAG ACCGCGCACG CCATCACGCC
ACCTACGTGA GCAACGTCGC CTACGCTGCG CACGAGGCCG CCGGCGCGGG CGTCACCATC
GTGCTGGAAC CCATCAACAC GCGCGACATG CCGGGCTTCT TCCTCACGCA CCAGGCGCAG
GCGCATGCGG TGTGCAAGGA AGTCGGCGCG ACGAACGTCA AGGTGCAGTT CGACCTGTAC
CACGCGCAGA TCATGGAGGG CGATCTGTCG GTCAAACTCA AGCAGTACGT CGAGGGCGTG
GGCCACGTGC AGATTGCCGG CGTGCCCGAT CGCCACGAAC CGGACGAAGG TGAGCTGAAC
TATCCGCACC TCTTTGCGTT GCTGGATGCG CTCGGCTATG ACGGCTGGGT CGGGTGTGAA
TATCGGCCGC GTGCCGGTAC GAGCGAAGGG CTCGGCTGGC TCAAGCGCTG GCGCGAAGGC
CAACGCTGA
 
Protein sequence
MPRFAANLSM MYQEHAFLDR FAAAAKDGFE GVEFLFPYDF DKADIRARLD DTGLTQALFN 
APPGDWAGGE RGIASLPGRE EEFKRGIATA LEYAQVLGNT RLHVMAGLLP AGADRARHHA
TYVSNVAYAA HEAAGAGVTI VLEPINTRDM PGFFLTHQAQ AHAVCKEVGA TNVKVQFDLY
HAQIMEGDLS VKLKQYVEGV GHVQIAGVPD RHEPDEGELN YPHLFALLDA LGYDGWVGCE
YRPRAGTSEG LGWLKRWREG QR