Gene Rpic12D_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3409 
Symbol 
ID8021094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3598822 
End bp3599733 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID644832203 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_002983345 
Protein GI241664985 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAT CGGCGGCTGA CCGGAAGGTT GGCGTGATCG GACTCGGCGC CATGGGTCTG 
GGCATTGCCA AGACCCTGCG TAATCACGGC TACACCGTGT ATGCCTGCGA TGCGCGCCCG
GGCGCCGCTG CAGATTTCGC CAAGGAAGGC GGCGTGGCCT GTGCAACGCC TGCCGAGGTG
GCAGCGGGTG TGGACGTGGT GGTCTCGGTG GTGGTCAACG CTGCGCAGAC GGAAGCCGTG
TTGTTCGGCG AGGCAGGCGC AGCGGGCGCC ATGCGACGGG GCAGCACGTT CGTCATGTGT
TCAACGGTGG ACCCGAACTG GTCGATAGCG CTGGAGGCGC GTCTCGCGCA GCAGGGCATT
CTGTACGTGG ATGGCCCTAT CTCCGGTGGC GCTGCCAAGG CCGCCTCGGG CCAGATGACC
ATGATGACCT CGGCCACGCC CGAGGCGTAT GCGGCGGCGG GCGACGTGCT CGATGCCATG
GCTGGCAAGG TCTATCGCCT GGGCGACAAG GCGGGCGCGG GCAGCAAGGT CAAGATCATC
AACCAGCTGC TGGCCGGCGT GCACATCGCC GCGGCCGCCG AAGCCATGGC ACTGGGCCTG
CGCGAAGGCG TGGCAGCGGA CGCGCTGTAC GAAGTCATCA CCCATAGCGC GGGCAACAGC
TGGATGTTCG AAAACCGCAT GGCCCACGTG CTGGCCGGCG ACTACACGCC GCTGTCCGCC
GTCGACATCT TCGTCAAGGA TCTGGGGCTC GTGCTCGATA CCGCGCGCGC GAGCAAATTC
CCGCTGCCAC TGGCGGCCAC CGCGCACCAG ATGTTCATGC AGGCGTCCAC CGCCGGCTAC
GCCCGTGAAG ACGACTCCGC CGTGATCAAG ATCTTCCCGG GGATCTCGTT GCCGGAGGGC
CAACCGAAAT GA
 
Protein sequence
MTQSAADRKV GVIGLGAMGL GIAKTLRNHG YTVYACDARP GAAADFAKEG GVACATPAEV 
AAGVDVVVSV VVNAAQTEAV LFGEAGAAGA MRRGSTFVMC STVDPNWSIA LEARLAQQGI
LYVDGPISGG AAKAASGQMT MMTSATPEAY AAAGDVLDAM AGKVYRLGDK AGAGSKVKII
NQLLAGVHIA AAAEAMALGL REGVAADALY EVITHSAGNS WMFENRMAHV LAGDYTPLSA
VDIFVKDLGL VLDTARASKF PLPLAATAHQ MFMQASTAGY AREDDSAVIK IFPGISLPEG
QPK