Gene Rpic12D_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3401 
Symbol 
ID8021086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3590850 
End bp3591485 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID644832195 
Productmethionine biosynthesis protein MetW 
Protein accessionYP_002983337 
Protein GI241664977 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02081] methionine biosynthesis protein MetW 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC AAACGCTGAA CCCCACGGCA CCCTCCGTCG TGCCGAACAT CCTGGCGGAC 
CGGGCCGACT TCCGCGCCAT CGCCCGCTGG ATCGAGCCGC GCTCCACCGT GCTCGACCTC
GGTTGCGCAG ACGGCAGCCT GCTGCGCGTG CTGCAGGATG AGCTGGATGT GCTGGCTTAC
GGCATTGAGA TCGACGATGC GGGCGTGCTG GCCTCCACCC AAAAAGGCGT GCACGTGATC
CAGCAGAACC TTGAGGGTGG GCTCGCGCTG TTCGAAGACA AGAGCTTCGA CACGGTGATC
CTGTCGCAGA CGCTGCAGAC CATCCACAAC ACGGCGCAGG TGCTGCGCGA GATGCTGCGC
GTGGGCCGTG AGTGCATCGT GTCTTTCCCG AACTTTGGTT ACTGGCCGCA CCGGCTGTCG
ATCTTCCGCG GGCGCATGCC CGTGTCGGAA TCGCTGCCGT ACGAGTGGTA CGACACGCCC
AACGTGCGCG TACTGACCAT CCGCGACTTT GAAGCGCTGG CGCCCAAGGT GGGACTGGTG
ATTCTCGACC GCGTGGTGCT GCACGAAGGC AACGTGGTGC GCTGGGGCGC CAACTGGCGC
GGCAGCGTGG CGGTGTACCG GGTGCGCGCC GGCTGA
 
Protein sequence
MTTQTLNPTA PSVVPNILAD RADFRAIARW IEPRSTVLDL GCADGSLLRV LQDELDVLAY 
GIEIDDAGVL ASTQKGVHVI QQNLEGGLAL FEDKSFDTVI LSQTLQTIHN TAQVLREMLR
VGRECIVSFP NFGYWPHRLS IFRGRMPVSE SLPYEWYDTP NVRVLTIRDF EALAPKVGLV
ILDRVVLHEG NVVRWGANWR GSVAVYRVRA G