Gene Rpic12D_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3400 
SymbolmetX 
ID8021085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3589639 
End bp3590853 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content64% 
IMG OID644832194 
Producthomoserine O-acetyltransferase 
Protein accessionYP_002983336 
Protein GI241664976 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID[TIGR01392] homoserine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA TCCAGGCTGA CCCCGCGGTC ACCGCACCCG ATGCGGCGCA GGCCGATACC 
TCTTCTCCGA CGGCACATCA GGGCAAACCG GCCAACGCCA TCGGTCTGGT CGTGCCCGAA
CGCATGCACT TTGCCGAGCC GCTGCAACTG CGCAACGGCT CGCAGATCAG CGGCTACGAC
CTGATGGTCG AGACCTACGG CACGCTCAAT GCCGACCGTT CCAACGCCGT GCTCATCTGC
CACGCGCTCA ACGCTTCGCA CCACGTGGCG GGCGTGCATG CCGAGGGCGA AGTCGGCTGG
TGGGACAACA TGGTCGGACC GGGCAAGCCG GTCGACACCA ACCGCTTCTT CGTCATCGGG
GTGAACAACC TGGGCTCGTG TTTCGGTTCG ACCGGCCCCA TGAGCCCGCA TCCGGAAACG
GGCCTGCCCT ACGGCGCACG CTTTCCCGTG GTGACGGTGG AAGACTGGGT GAACGCGCAG
GCCCGCGTGG CGGATCGTTT CGGCATCCAG CAGTTTGCGG CGGTGATGGG CGGCAGCCTC
GGCGGCATGC AGGCGCTGGC CTGGAGCCTG ATGTATCCGG ACCGGTTGCG GCACTGCGTG
GTGGTGGCGT CCACGCCCAA GCTGTCGGCG CAGAACATCG CCTTCAACGA GGTAGCGCGC
AGCGCGATCC TGTCCGACCC CGATTTCCAC GGCGGGGATT ACTACGCGCA CAACGTCAAG
CCGAAGCGCG GTTTGCGCGT GGCCCGGATG ATCGGCCACA TCACATATCT GTCGGACGAG
GACATGGCGG CGAAATTCGG CCGCGAGCTG AAGGCGGATG ACATCCGTTT CTCGTTCGAC
GTGGAGTTCC AGGTCGAGAG CTACCTGCGC TACCAGGGCG ACAAGTTTGC CGAATATTTC
GATGCGAACA CGTATCTGCT CATCACGCGC GCGCTGGATT ACTTCGACCC CGCGCTGGCT
TACGGCGGCA ATCTGACCAA GGCCGTTGCG CACACCAAGG CGAGCTATCT CGTCGTCAGC
TTCATGACTG ACTGGCGATT CGCCCCTTCG CGCAGCCGCG AGCTGGTCAA GGCGCTGCTC
GACAACAAGC ATCCCGTCAC CTACGGCGAG ATCGACGCGC CGCACGGTCA CGACGCTTTC
CTGTTGGAAG ACGCGCGCTA CCACGCGCTG GTCCGCGCCT ATTACGAACG CATCGCGCAG
GAGATCGGCG CATGA
 
Protein sequence
MTDIQADPAV TAPDAAQADT SSPTAHQGKP ANAIGLVVPE RMHFAEPLQL RNGSQISGYD 
LMVETYGTLN ADRSNAVLIC HALNASHHVA GVHAEGEVGW WDNMVGPGKP VDTNRFFVIG
VNNLGSCFGS TGPMSPHPET GLPYGARFPV VTVEDWVNAQ ARVADRFGIQ QFAAVMGGSL
GGMQALAWSL MYPDRLRHCV VVASTPKLSA QNIAFNEVAR SAILSDPDFH GGDYYAHNVK
PKRGLRVARM IGHITYLSDE DMAAKFGREL KADDIRFSFD VEFQVESYLR YQGDKFAEYF
DANTYLLITR ALDYFDPALA YGGNLTKAVA HTKASYLVVS FMTDWRFAPS RSRELVKALL
DNKHPVTYGE IDAPHGHDAF LLEDARYHAL VRAYYERIAQ EIGA