| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3390 |
|---|
| Symbol | |
|---|
| ID | 8021075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3580365 |
|---|
| End bp | 3580862 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644832184 |
|---|
| Product | protein of unknown function DUF461 |
|---|
| Protein accession | YP_002983326 |
|---|
| Protein GI | 241664966 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGT CCCGGTTGAT CCGTTCTTCC GCAGCCCTGG CTGTGCTCAC CGCTGGCCTG
CTCGCCAGCG TCACCGCTTA CGCGCAGGTC ACCGTGCAAG ACGCGTGGGT GCGCGGCACG
GTGCCCGGCC AGACGTCCAG CGGCGCATTC ATGACGCTGC AATCGGCCGA CGGTGCCAAG
GTGGTGGGCG TGTCGACGCC GGTGGCCGGC ACGGCCGAGA TTCACGAAAT GAAGATGGAA
GGCAACGTCA TGCGCATGCG CGCCGTTCAG TCACTGGACC TGCCGAAGGG CCAGACGGTG
CAGCTCAAGC CGGGCGGCTA CCACGTGATG CTCATGGACC TGAAGCAGCC CCTGGCCAAG
GACGCCACCG TGCCGCTCAC GCTCAAGGTC GAGCTGGCCG ACAAGCGCGT CGTCGAGCAG
AAGGTCGAGG CCCGCGTGCG CGACCTGACC GCCGGCAACA TGCCCGCCAT GAACCACGGT
GGCGAACACA AACATTGA
|
|---|
| Protein sequence | MMTSRLIRSS AALAVLTAGL LASVTAYAQV TVQDAWVRGT VPGQTSSGAF MTLQSADGAK
VVGVSTPVAG TAEIHEMKME GNVMRMRAVQ SLDLPKGQTV QLKPGGYHVM LMDLKQPLAK
DATVPLTLKV ELADKRVVEQ KVEARVRDLT AGNMPAMNHG GEHKH
|
|---|
| |