Gene Rpic12D_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3388 
Symbol 
ID8021073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3578250 
End bp3578828 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID644832182 
Producttwo component transcriptional regulator, Fis family 
Protein accessionYP_002983324 
Protein GI241664964 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC CCGCCCCCTT TCTGATCCTC GATGACGACG ACGTCTTTGC GCAGACGCTG 
GCGCGCGCGC TCACGCGCCG CGGCTTTGCT CCGCAGATCG CCCACACCGG CGGCGAAGCA
TTGGCCCTGG CGCGCCAGAC ACGCTTCTCG TATGTCACTG TCGATCTACA TCTGGCTGCC
AGCGACAAGG GACTGATGCC CCATGGCGGC ACGGATTCGG GCCTGCACTG GATTGCTCCA
CTGCGCCAGG CGCTGCCCGA GGCGCGCATG TTGATCCTCA CGGGCTACGC GAGCATCGCC
ACCGCCGTGC AGGCGGTCAA GCTAGGCGCT GATGAATATT TGGCCAAGCC GGCCAATGTC
GACTCGATTT TGCTGGCGCT GCAAGTCGGC GTGTCTGAAG CCGTGGCTGA ACAGACGATG
GAGAACCCCG CGCCGCTGTC CGTCGCGCGC CTGGAGTGGG AACACATTCA GCGCGTACTC
GCCGAGCACG GCGGCAATAT CTCCGCCACG GCGCGGGCGC TCAACATGCA CCGTCGGACG
CTGCAGCGCA AATTGGGCAA GCGGCCGGTC GCAAAATAA
 
Protein sequence
MQQPAPFLIL DDDDVFAQTL ARALTRRGFA PQIAHTGGEA LALARQTRFS YVTVDLHLAA 
SDKGLMPHGG TDSGLHWIAP LRQALPEARM LILTGYASIA TAVQAVKLGA DEYLAKPANV
DSILLALQVG VSEAVAEQTM ENPAPLSVAR LEWEHIQRVL AEHGGNISAT ARALNMHRRT
LQRKLGKRPV AK