Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3388 |
Symbol | |
ID | 8021073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3578250 |
End bp | 3578828 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832182 |
Product | two component transcriptional regulator, Fis family |
Protein accession | YP_002983324 |
Protein GI | 241664964 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGC CCGCCCCCTT TCTGATCCTC GATGACGACG ACGTCTTTGC GCAGACGCTG GCGCGCGCGC TCACGCGCCG CGGCTTTGCT CCGCAGATCG CCCACACCGG CGGCGAAGCA TTGGCCCTGG CGCGCCAGAC ACGCTTCTCG TATGTCACTG TCGATCTACA TCTGGCTGCC AGCGACAAGG GACTGATGCC CCATGGCGGC ACGGATTCGG GCCTGCACTG GATTGCTCCA CTGCGCCAGG CGCTGCCCGA GGCGCGCATG TTGATCCTCA CGGGCTACGC GAGCATCGCC ACCGCCGTGC AGGCGGTCAA GCTAGGCGCT GATGAATATT TGGCCAAGCC GGCCAATGTC GACTCGATTT TGCTGGCGCT GCAAGTCGGC GTGTCTGAAG CCGTGGCTGA ACAGACGATG GAGAACCCCG CGCCGCTGTC CGTCGCGCGC CTGGAGTGGG AACACATTCA GCGCGTACTC GCCGAGCACG GCGGCAATAT CTCCGCCACG GCGCGGGCGC TCAACATGCA CCGTCGGACG CTGCAGCGCA AATTGGGCAA GCGGCCGGTC GCAAAATAA
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Protein sequence | MQQPAPFLIL DDDDVFAQTL ARALTRRGFA PQIAHTGGEA LALARQTRFS YVTVDLHLAA SDKGLMPHGG TDSGLHWIAP LRQALPEARM LILTGYASIA TAVQAVKLGA DEYLAKPANV DSILLALQVG VSEAVAEQTM ENPAPLSVAR LEWEHIQRVL AEHGGNISAT ARALNMHRRT LQRKLGKRPV AK
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