| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3375 |
|---|
| Symbol | |
|---|
| ID | 8021060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3564683 |
|---|
| End bp | 3565876 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644832169 |
|---|
| Product | PUA domain containing protein |
|---|
| Protein accession | YP_002983311 |
|---|
| Protein GI | 241664951 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCC TGATTCTGAA GCCCGGCAAG GAGCGCTCGC TGCTGCGCCG GCACCCGTGG
ATTTTCGCCA ACGCCATCGA TCGCGTGGAG GGCAAGCCGG CCTCCGGCGC GACCGTCATC
GTGCGCGCGC ACAACGGCCA GTTTCTGGCG CGCGCCGCGT TCAGCCCTGT CTCGCAGATT
CGCGCGCGCG TGTGGAGCTT TGATGAATCG GAGCCCGTCG ACCACGCGTT CTTCAAGCGC
CGTATTGCCG CCGCCGTGGC GTACCGCCGC GCGTGGGTGC ACGACACCGA CGCCGTGCGC
CTCGTCATGG GCGAAGCCGA CGGCCTGCCC GGCCTGATCG TCGACCAGTA CGGCACAGGC
GATGCTGGCC AGCTCGTCTG CCAGTTCAGC GCCGCCGGTG TGGAGCACTG GAAACAGGCG
ATCGTCGCCG CGCTCGTCAA AGAAACCGGG TGCCCGAACG TGTACGAACG GTCGGACGTG
AGCGTGCGCG AGCGCGAAGG CCTGGAGCAG ATGACCGGTG TGCTGGCCGG CGCCGAGCCG
CCCGCCGATC TGTCCGCCAC CGAGCACGGC GTGCGTTATT ACGTGGACGT GCGCGAAGGT
CACAAGACGG GCTTCTACGT GGACCAGCGT GACAACCGCG CGCTCGTCGG CGCCTTGGCG
CGCGATCGCG ATGTGCTGAA CTGCTTCTGC TATACGGGCG GGTTTTCGCT GGCGGCGCTC
AAGGGCGGGG CGCGCTCGGT GGTGTCGATC GACTCGTCGG GCGAGGCATT GGCGGTGGCT
GAGCGCAACG TCACGCTCAA CGGCTTCGAT CCGGCGCGCG CCGAGTGGCT GGACGCGGAC
GTCTTCAAGT CGCTGCGGAA CTTCCGCGCG GAAGGCCGCC AGTTCGACTT GATCGTGCTG
GATCCGCCCA AGTTTGCGGC CTCGGCGCAG CAGGTCGATC GCGCGGCACG GGCGTACAAG
GAGATCAACC TGGTCGGCAT GCAGTTGCTG CGCCCGGGCG GCCTGTTGTT CACGTATTCG
TGCTCGGGTG CAATCGACGC AGACCTGTTC CAGAAGATCG TCGCGGGCGC GGCGGCGGAT
GCCAAGGTCA CGGCGCGTAT CCAGCGCCGG CTGGCGGGCG GCGTCGACCA CCCGCTGCTG
ACGAGCTTCC CGGAAGGCGA ATACCTCAAG GGCCTGCTGC TGCAAGTCAG CTAG
|
|---|
| Protein sequence | MQTLILKPGK ERSLLRRHPW IFANAIDRVE GKPASGATVI VRAHNGQFLA RAAFSPVSQI
RARVWSFDES EPVDHAFFKR RIAAAVAYRR AWVHDTDAVR LVMGEADGLP GLIVDQYGTG
DAGQLVCQFS AAGVEHWKQA IVAALVKETG CPNVYERSDV SVREREGLEQ MTGVLAGAEP
PADLSATEHG VRYYVDVREG HKTGFYVDQR DNRALVGALA RDRDVLNCFC YTGGFSLAAL
KGGARSVVSI DSSGEALAVA ERNVTLNGFD PARAEWLDAD VFKSLRNFRA EGRQFDLIVL
DPPKFAASAQ QVDRAARAYK EINLVGMQLL RPGGLLFTYS CSGAIDADLF QKIVAGAAAD
AKVTARIQRR LAGGVDHPLL TSFPEGEYLK GLLLQVS
|
|---|
| |