Gene Rpic12D_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3373 
Symbol 
ID8021058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3562953 
End bp3563642 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID644832167 
Productprotein of unknown function DUF484 
Protein accessionYP_002983309 
Protein GI241664949 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.765348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC AAGACGTCGC CAACTACCTG CAGGCGCATC CGGCCTTTTT TGAAGAGCAT 
GCGGAGCTGC TGGCCGCCAT CCAGCTCACC AGCCCGCACA GCCATCGCGC CGTGTCGCTG
CAGGAGCGCC AGATGGAGAT CCTGCGCGAC AAGAACAAGC ATCTCGAACT CAAGCTGTCG
GACCTGATGC GCCACGGCAA CGAGAACGAC CGCACGCAGC AGCGCGTGCA CGCATGGACG
ACGCGCCTGC TGGGCGAGGC CGACACGCAT GCGCTGCCGT ATGCCGTGCA GGATGGCCTG
CGTGAAATCT TTGACGTGCC GGCCGTGGCG CTACGCGTGT GGCAGGTCGG CGAAGAATTC
GCGCATCTGG AAGTCGCGCA GGGCGTGAGC GAGGAAGTGC GCCTGTTTGC GACCGGTCTG
CGCGCGCCGT ATTGCGGCGC CAATGCCGGC TTTGAAGCCG CCGGCTGGCT CGATACGACC
GATACCGGCG GCGCACCGAT CGAATCGCTT GCCATCGTCA CGCTGCGCGT GCCGGTGCGT
GGGGATGCCG ATGCCAGCGC CGCGCCGGCT TTCGGCCTGC TGGTACTCGG CTCGCCGGAC
GCCCGCCGTT TCCATGACGG CATGGGCACG ACCTACCTCG CGCAGATCGG CGAACTGGCC
GCTGCCGCGC TCAACCGACT GCGCGACTGA
 
Protein sequence
MNAQDVANYL QAHPAFFEEH AELLAAIQLT SPHSHRAVSL QERQMEILRD KNKHLELKLS 
DLMRHGNEND RTQQRVHAWT TRLLGEADTH ALPYAVQDGL REIFDVPAVA LRVWQVGEEF
AHLEVAQGVS EEVRLFATGL RAPYCGANAG FEAAGWLDTT DTGGAPIESL AIVTLRVPVR
GDADASAAPA FGLLVLGSPD ARRFHDGMGT TYLAQIGELA AAALNRLRD