Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3369 |
Symbol | gatA |
ID | 8021054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3558416 |
End bp | 3559903 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832163 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_002983305 |
Protein GI | 241664945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAT CCACGATCAA AGCCCTGTCC GCCCAACTCG CCGCCAAGGA GGTTTCGGCG GAGGAACTGG CGCGCCATTA CCTGTCGCGC ATCGAGGCGG GGGCGCACCT CAATGCCTTT ACCCATGTCG ACGCCGAGGC GACGCTTGCC CAGGCGCGGG CCGCCGACGC GCGCATTGCG GCCGGCAACG CGGCGCCGCT GACCGGCGTG CCCATCGCGC ACAAGGACGT GTTCGTCACC CGCGGCTGGC GTGCCACGGC GGGCTCCAAG ATGCTCGGCA ATTACACCAG CCCGTTTGAC GCCACCGTCG TCGAGCGCCT GGGGGCGGCC GGCATGGTGA CGCTTGGCAA GACCAACATG GACGAATTCG CGATGGGCTC GTCCAATGAG AACTCGGCGT TCGGCGCGGT CAAGAACCCG TGGAACCTCG AGCACGTGCC GGGCGGCTCG TCGGGAGGCT CCGCCGTGGC GGTGGCGGCC GATCTGGTGC CCGCTGCAAC GGGGACGGAC ACGGGCGGCT CGATCCGCCA GCCGGCATCG TTCTCGGGCA TTACGGGGAT CAAGCCGACG TACGGCCGCG TGTCGCGCTA CGGCATGATC GCTTTCGCTT CATCGCTGGA CCAGGGCGGC CCGATGGCCC GCACGGCCGA GGATTGCGCG CTGCTCCTGT CTGCCATGGC CGGCTTTGAC CCGCGCGATT CCACCAGCCT GGAACCCGGC CGCGGCGGCG ATGTGGAAGA TTTCGGCCGC CTGCTCGGCC AGCCGCTGCA AGGCGCCGAT GCTGCGCGCC CGCTGGCCGG CCTGCGCATC GGCCTGCCCA AGGAGTATTT TGGCGAAGGC CTGGCCGACG ACGTGCGCGC CACGGTGCGC GCGGCGCTGG GCGAGCTGGA AAAGCTCGGC GCCACGCTGG TCGACATCAG CCTGCCGAAG ACCGAATTGT CGATCCCGAC GTATTACGTG ATCGCCCCGG CCGAGGCGTC GTCCAACCTG TCGCGCTTTG ACGGCGTGCG CTACGGTCAC CGCGCGGCGG AATACCGCGA TCTGGCCGAC ATGTACCGCA AGTCGCGCGC CGAGGGTTTT GGCTGGGAGG TCAAGCGCCG GATCCTGGTG GGCACCTATG TGCTGTCCCA CGGGTATTAC GACGCCTATT ACCTCCAGGC GCAGAAGATC CGCCGGATCA TCGCGCAGGA TTTCCAGAAC GCATTCGCGC AGTGCGACGT GATCATGGGC CCCGTCGCCC CGACCGTCGC CTGGAAGATC GGCGAGAAGA GCGATGATCC TGTGCAGATG TACCTTGAAG ACATCTTCAC CCTGTCGACC AGCCTGGCAG GCCTGCCGGG CATGAGCGTG CCGGCCGGTT TCGGCGCCAA CGGTCTGCCA GTTGGCTTGC AGATCATCGG CAACTATTTT GAAGAGGCAC GCATGCTGCA GATCGCGCAC GCGTTCCAGC AGGCGACCGA CTGGCACAAC CGCCAGCCTG CGGCCTGA
|
Protein sequence | MTASTIKALS AQLAAKEVSA EELARHYLSR IEAGAHLNAF THVDAEATLA QARAADARIA AGNAAPLTGV PIAHKDVFVT RGWRATAGSK MLGNYTSPFD ATVVERLGAA GMVTLGKTNM DEFAMGSSNE NSAFGAVKNP WNLEHVPGGS SGGSAVAVAA DLVPAATGTD TGGSIRQPAS FSGITGIKPT YGRVSRYGMI AFASSLDQGG PMARTAEDCA LLLSAMAGFD PRDSTSLEPG RGGDVEDFGR LLGQPLQGAD AARPLAGLRI GLPKEYFGEG LADDVRATVR AALGELEKLG ATLVDISLPK TELSIPTYYV IAPAEASSNL SRFDGVRYGH RAAEYRDLAD MYRKSRAEGF GWEVKRRILV GTYVLSHGYY DAYYLQAQKI RRIIAQDFQN AFAQCDVIMG PVAPTVAWKI GEKSDDPVQM YLEDIFTLST SLAGLPGMSV PAGFGANGLP VGLQIIGNYF EEARMLQIAH AFQQATDWHN RQPAA
|
| |