Gene Rpic12D_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3368 
SymbolgatC 
ID8021053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3558018 
End bp3558317 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content66% 
IMG OID644832162 
Productaspartyl/glutamyl-tRNA amidotransferase subunit C 
Protein accessionYP_002983304 
Protein GI241664944 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCG AACTCTCCGA CGTCAAACGC ATCGCCCATC TCGCCCGTAT CGAAGTCTCC 
GAGGGCGAGG CCGCGCAAAC CCTCACGCAG CTCAACCAGT TTTTCTCGCT GGTCGAGCAG
ATGCAGGCCG TGGACACCAC CGGCATCGAG CCGATGGCCC ACCCCATCGA GCAGGTCCAG
GCGCAAGCCC AGCGTCTGCG CGACGATGCC GTCACCGAGG CCGACCGCCG TGCCGACTAC
CAGCAATGCG CCCCGGCCAC CGAGGCCGGC CTGTACCTTG TGCCCAAGGT GATCGAGTAA
 
Protein sequence
MALELSDVKR IAHLARIEVS EGEAAQTLTQ LNQFFSLVEQ MQAVDTTGIE PMAHPIEQVQ 
AQAQRLRDDA VTEADRRADY QQCAPATEAG LYLVPKVIE