Gene Rpic12D_3363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3363 
Symbol 
ID8021048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3551034 
End bp3552185 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID644832157 
Productrod shape-determining protein RodA 
Protein accessionYP_002983299 
Protein GI241664939 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC TGGACAAGCG CCGCATATTC AACGTCATCA AGTCGCTCTT CACGGGCTTC 
GATGGCCCGC TGGCGCTGAT CGTCTTCCTG CTGCTCGGGA CGGGATTGGT GGCCCTGTAT
TCGGCCGCCA TCGACATGCC GGGCCGGGTG GAAGACCAGG TCCGCAACAT CCTGCTGTCG
TTCGTGCTGA TGTGGATCAT CGCCAACCTG CCGCAGCAGA CACTGATGCG TTTTGCCGTG
CCGCTCTACA CCGTGGGCGT GGCGCTGTTG ATTGGCGTGG CGGCGTTCGG GCTGATCCGC
AAGGGCGCGC GGCGGTGGCT CAATATCGGC GTGGTGGTCC AGCCTTCCGA GATCATGAAG
ATCGCCATGC CGCTGATGCT GGCGTGGTAC TTCCAGAAGC GCGAGGGCGT GATCCACTGG
TACGACTATC TGGCGGCCGC CTTGCTGCTG CTGATTCCCG TCGGGCTCAT CGCCAAGCAG
CCGGACCTCG GCACCGCGCT GCTGGTCCTG GCAGCAGGCA TCTACGTGAT CTACTTCGCC
GGGCTGTCTT GGCGGCTGAT CGTGCCGGTG CTGGTGGTTG CTGTCACGGC GATCACGTTG
GTGGTGTCGT TCGAATCGCG CATTTGCGCG CCGGGCGTGA ACTGGCCGAT CCTGCACGAC
TACCAGCAAC ACCGCGTCTG TACGCTGCTC GACCCGACCA CCGACCCGCT GGGCAAGGGC
TTCCACACCA TCCAGTCGAT CATCGCTATC GGCTCGGGCG GCGTGACGGG CAAGGGATGG
CTGAAGGGCA CGCAAACCCA CCTGGAGTTC ATCCCCGAGA AGCACACCGA CTTCATCTTC
GCGGTGTATT CAGAGGAATT CGGGCTGGTG GGCAACGGCG TGCTGCTGTT CCTCTATCTG
CTGCTGATCT TGCGCGGGCT CTTCATTGCC GCCAATGCGG GCACACTGTT CGGGCGCCTG
CTGGCAGGGT CGATCACGCT GATCTTCTTC ACCTACGCCT TCGTCAACAT GGGCATGGTG
AGCGGCATCC TGCCTGTGGT GGGCGTGCCG CTGCCGCTCA TCAGTTACGG GGGGACGGCG
CTTGTCACGC TGGGCATGGG CATCGGCATC CTGATGAGCA TCGCGCGACA GAAACGCTTC
GTACAGACCT GA
 
Protein sequence
MDKLDKRRIF NVIKSLFTGF DGPLALIVFL LLGTGLVALY SAAIDMPGRV EDQVRNILLS 
FVLMWIIANL PQQTLMRFAV PLYTVGVALL IGVAAFGLIR KGARRWLNIG VVVQPSEIMK
IAMPLMLAWY FQKREGVIHW YDYLAAALLL LIPVGLIAKQ PDLGTALLVL AAGIYVIYFA
GLSWRLIVPV LVVAVTAITL VVSFESRICA PGVNWPILHD YQQHRVCTLL DPTTDPLGKG
FHTIQSIIAI GSGGVTGKGW LKGTQTHLEF IPEKHTDFIF AVYSEEFGLV GNGVLLFLYL
LLILRGLFIA ANAGTLFGRL LAGSITLIFF TYAFVNMGMV SGILPVVGVP LPLISYGGTA
LVTLGMGIGI LMSIARQKRF VQT