Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3361 |
Symbol | |
ID | 8021046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3547916 |
End bp | 3548854 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832155 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002983297 |
Protein GI | 241664937 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.955701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGTT TGCAGTCGAT GCGGGTGTTT TCCAAGGTGG TGGAGCTTGG CAGCTTCGCC CGGGCGGCCC AGCATCTGTC GATGAGCAAT GCCGTGGTCA CGCGGTACGT GGCCGATCTT GAGGCGCATC TCGGCACGCG CCTGCTCAAC CGCACCACGC GCAGCCTGTC GCTGACCGAC GTGGGCGAAA CCTACCTGCA GCGCTGTGCG CAGATCCTGC TCGACATTGA CGAGGCCGAA TCGCTCGCCA CCTCGCGCAG CCAGGCGCTC GTCGGTGGCC TGCGCATCGT CGCCCCCGTC ATGTTCGGGC TGCACGTGCT GCCGATGCTG CTCGCGCGCT TCCAGCAGCT TTATCCCGAG GTAACGTTTG ACGTGGCGCT GTCCGATCGC CCGATCGACA TCGTCGAGGA TGGCCGTGAC GTCGGCATCA TGGTTTCGGA ACTCGGCCTC GGCTCGCACC TCGTCGCACG CCGGATGATT TCCGCCGAGA TGGTCATGGC CGCCACGCCA GCCTACCTCC GCCAGCATTC CACGCCCCAG CGCGCCGAAG ATATTGCCGA GCACCGCGTC ATCGCCATGT GGCATCCGCA ACTGCGTCAC GAATGGGAGA TGAGCACGCC CGACGGCCAG TCGATCTCGG TGCCGGTGCA GCCCTCGCTC GTCACGAGCA ATGCCGAACT GATGCACCGC GCGGTGCTCG CCGACATGGG CATCGCGATT CTGTCGTCGT ACATGGCGCG TCCGGATCTC GAATCCGGAC GACTGGTGCG CGTGCTGCCG CAATACAAGT TGCCGCACCG GTCGCTGTCG CTGGTGTACC CGAGCCGCAA GTTCCTGCCG ACGAAGGTCC GCACGTTCAT CGACTACATG CTGGCCCAGG CGATGGAGGT CAAGCACAGC GAGGCGCGTG CCGGACGCGG CCTGAGCGAG GCCGCATAA
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Protein sequence | MDRLQSMRVF SKVVELGSFA RAAQHLSMSN AVVTRYVADL EAHLGTRLLN RTTRSLSLTD VGETYLQRCA QILLDIDEAE SLATSRSQAL VGGLRIVAPV MFGLHVLPML LARFQQLYPE VTFDVALSDR PIDIVEDGRD VGIMVSELGL GSHLVARRMI SAEMVMAATP AYLRQHSTPQ RAEDIAEHRV IAMWHPQLRH EWEMSTPDGQ SISVPVQPSL VTSNAELMHR AVLADMGIAI LSSYMARPDL ESGRLVRVLP QYKLPHRSLS LVYPSRKFLP TKVRTFIDYM LAQAMEVKHS EARAGRGLSE AA
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