| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3360 |
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| Symbol | |
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| ID | 8021045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3545212 |
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| End bp | 3547842 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832154 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002983296 |
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| Protein GI | 241664936 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.96718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGG CTCTCATCAT TGCCGAAAAA CCGTCGGTCG CCGCTGATAT CGCGCGCGCG
CTGGGTGGCT TCACCAAGCA CGACGAGTAC TTTGAGAGCG ACGACTACGT CCTCTCCTCG
GCGGTTGGCC ACCTGGTCGA GATTGCCGCG CCGGATGAAT ACGAGGTCAA ACGCGGCAAA
TGGAGCTTCG CGCATCTGCC CGTGATCCCG CCGCACTTTG ATCTGCGCCC GATCGCCAAG
TCCGAGTCGC GCCTGAAGGT GCTGACGCGC CTGATCAAGC GCAAGGACGT GACCAGTCTG
ATCAACGCAT GTGACGCGGG GCGCGAAGGC GAGTTGATCT TCCGCCTGAT CGCGCAACAT
GCAAACACCA AGCTGCCGGT AAAGCGACTG TGGCTCCAGT CGATGACGCC GCAATCCATC
CGTGATGGCT TTGGCAAGCT GCGCAGCAAC GAAGACATGA TGCCGCTAGC GGACGCCGCG
CGCTGCCGTT CCGAGGCCGA TTGGCTCGTC GGTATCAACG GCACGCGCGC CATGACGGCG
TTCAACAGCA AGGGCGGCGG CTTCTTCCTG ACCACCGTGG GCCGCGTGCA AACGCCCACG
TTGTCGATCG TGGTGGAGCG CGAAGAGAAG ATCAAACGCT TCGTGCCGCG CGATTACTGG
GAAGTGCGCG CCGAGTTCAT CGCCGCGGCC GGCCTGTACG AAGGCCGCTG GTTCGACCCG
AAGTTCAAGA AGAACGAGTT CGATCCAGAG CAACGCGATT CGCGTCTGTG GAGCGAGGCC
GAGGCCAAGA GCATCGTTGC CGCGTGCCGC GACAAGCCGG GCTCGGTGAC GGAAGAATCG
AAGCCGTCGA CGCAGATGTC GCCGGCGCTG TTCGACCTGA CCAGCCTGCA GCGCGAGGCC
AACGGCCGCT TCGGCTTCTC GGCCAAGAAC ACGCTGGGCC TGGCGCAGGC GCTGTATGAA
AAGCACAAGG TGCTGACCTA CCCGCGTACC GATTCGCGCG CGCTGCCCGA AGACTACCTG
GGCACGGTCA AGCAGACGCT GGACATGCTG GGCGAAAGCT CGCCCAACTA TCTGACGCAT
GCGAAGAAGA TCCTGGCCAA CCAGTGGGTC AAGCCGAACA AGCGGATCTT CGACAACAGC
AAGATCAGCG ATCACTTCGC CATCATCCCG ACGCTGCAGG CGCCGAAGAA CCTCTCGGAG
CCCGAGCAGA AACTGTACGA CCTGGTGGTG CGCCGCTTCC TGGCGGTGTT CTTCCCGGCC
GCCGAATACC AGGTCACCAC GCGGATTACC GAGGTGGCCG GGCATCACTT CAAGACCGAA
GGCAAGGTGC TGGTGAATCC GGGCTGGCTG GTCGTGTACG GCCGCGAGGC GCAGGGCGAA
GACGCCAACC TCGTGCCGGT CGCCAAGGAC GAGAAGGTCA AGACGGACAA GGTCGAGCCG
GTCGGCCTGA CCACCAAGCC GCCCGCACGC TACAACGAAG CGACGCTGCT GTCGGCCATG
GAAGGTGCCG GCAAGCTGGT CGACGACGAC GCGCTGCGCG AAGCCATGGC CGGCAAGGGC
CTGGGCACGC CAGCGACGCG CGCGGCCATC ATCGAAGGTC TGCTGACGGA AAAGTACCTC
GTGCGCGAGG GCCGTGAGCT GATCCCGACG GCCAAGGCCT TCCAGCTGAT GACGCTGCTG
CGCGGCCTGG GCGTGGAAGA ACTGACGCAG GCCGAGTTGA CCGGCGGCTG GGAGCACAAG
CTTTCGCTGA TCGAACGCGG TCAGCTGGAG CGCGACGAAT TCATGCGCGA GATCGCGCAG
ATGACGCAGC AGATCGTCAA GCGCGCGAAG GAATACGACA GCGACACCAT CCCCGGCGAC
TACGCGACGC TCTCCACGCC GTGCCCGCAA TGCGGCCACG TGGTCAAAGA GAACTACCGC
CGCTTCGCCT GCAGCCACTG CGATTTCTCG ATCAGCAAGA TCCCGGGTGG CCGCCAGTTC
GAGCTGGACG AGGTGGAAGA GCTGCTGACC AACAAGACCA TCGGCCCGCT GCAGGGCTTC
CGCAGCAAGA TGGGCCGGCC GTTTGCGGCC ATCCTCAAGC TGGCGCAGGA AGACGGTCAC
TGGAAGATGG AGTTCGACTT CGGCCAGAAC GACGAAGACG ATGGCGAGCC GGTCGATTTC
TCCGGCCAGG AAAGCGTCGG CCACTGCCCG AAGTGCAACG GCAACGTCTA CGAGCACGGC
CTGAAGTACG TGTGCGAGAA CGCCGTGGCG CAGCCCAAGA CCTGCGACTT CACCACGGGC
AAGATCATCC TGCAGCAGGA GATCAGCCGC GAGCAGTTGG CCAAGCTGCT GACCGAAGGC
AAGACGGACC TGCTGACCGG CTTCAAGTCG GCGCGCACAG GGCGCAACTT CAAGGCGTTC
CTCGTCAAGC AGCCGGACGG CAAGATCGGC TTCGAATTCG AGCCGCGTGG CGAAGGCAAG
GGCAAGCCCG GTGCCAAGAC TGCGGCGAAG AAGACGACGG CTGCGGCCAA GACGCCCGCT
GCCAAGAAGG CGCCCGCCAA GACCGCAAGC AAGACCGCCG CCAAGAAGAC CCCGGCGCGC
AAGAAAGCCG CTGAAGCCGA GGCCGACGAG GAAAGCACCA GCGAAACCTG A
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| Protein sequence | MSKALIIAEK PSVAADIARA LGGFTKHDEY FESDDYVLSS AVGHLVEIAA PDEYEVKRGK
WSFAHLPVIP PHFDLRPIAK SESRLKVLTR LIKRKDVTSL INACDAGREG ELIFRLIAQH
ANTKLPVKRL WLQSMTPQSI RDGFGKLRSN EDMMPLADAA RCRSEADWLV GINGTRAMTA
FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IKRFVPRDYW EVRAEFIAAA GLYEGRWFDP
KFKKNEFDPE QRDSRLWSEA EAKSIVAACR DKPGSVTEES KPSTQMSPAL FDLTSLQREA
NGRFGFSAKN TLGLAQALYE KHKVLTYPRT DSRALPEDYL GTVKQTLDML GESSPNYLTH
AKKILANQWV KPNKRIFDNS KISDHFAIIP TLQAPKNLSE PEQKLYDLVV RRFLAVFFPA
AEYQVTTRIT EVAGHHFKTE GKVLVNPGWL VVYGREAQGE DANLVPVAKD EKVKTDKVEP
VGLTTKPPAR YNEATLLSAM EGAGKLVDDD ALREAMAGKG LGTPATRAAI IEGLLTEKYL
VREGRELIPT AKAFQLMTLL RGLGVEELTQ AELTGGWEHK LSLIERGQLE RDEFMREIAQ
MTQQIVKRAK EYDSDTIPGD YATLSTPCPQ CGHVVKENYR RFACSHCDFS ISKIPGGRQF
ELDEVEELLT NKTIGPLQGF RSKMGRPFAA ILKLAQEDGH WKMEFDFGQN DEDDGEPVDF
SGQESVGHCP KCNGNVYEHG LKYVCENAVA QPKTCDFTTG KIILQQEISR EQLAKLLTEG
KTDLLTGFKS ARTGRNFKAF LVKQPDGKIG FEFEPRGEGK GKPGAKTAAK KTTAAAKTPA
AKKAPAKTAS KTAAKKTPAR KKAAEAEADE ESTSET
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