Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3353 |
Symbol | |
ID | 8021038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3537566 |
End bp | 3538222 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832147 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_002983289 |
Protein GI | 241664929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCGC TGGGCATCGT CAATCTGCCG CTCTTCATGC TGGCCGTGTT TCTGCTGAAT GTGACGCCGG GGCCCGACAC GGCCTATATC GTCGGGCGGA GCGTCTCGCA AGGACGCACG GCGGGGCTGC TGTCGTCGCT GGGGGTATCG GCGGGCTGCT GCGTGCACGT GCTGGCGGTC GCGTTCGGGC TGACGGCGCT GCTGGCCGCG TCCACCGTGG CGTTCACGGT CATCAAGGTG GTGGGTGCGG CGTACCTGAT CTATCTGGGC GGCCGCATGC TGCTGGCGCC GCCTGAACGT GATGACGCCA CGGTCGAACA AGCGGAGACG CCTGCCGCCA AGCGCGTGCG TCCACTCAAG TCGTTGTTCA TGCAGGGGTT CCTCACCAAT GTGTTGAACC CGAAGGTCGT GCTATTCTTC CTGTCGTTCT TCCCGCAGTT CGTCGATCCG CACGCCGCCC ACAAGGCGCT GGCGTTCCTG GCATTGGGGG CGGTGTTCAT CGTCATGTCG ACGATCTGGA ACAGCCTTGT GGCGTGGGTC GCCGCGAGCG TCACGCGCCG CGTGGCGGGC AAGCCGGGGA TCAAACGCTG GCTCGATCGC GTGGTCGGCA CGGCGTTCAT TGGGCTTGGT GCGCGGTTGG CGTTCACCAC CCGTTGA
|
Protein sequence | MTALGIVNLP LFMLAVFLLN VTPGPDTAYI VGRSVSQGRT AGLLSSLGVS AGCCVHVLAV AFGLTALLAA STVAFTVIKV VGAAYLIYLG GRMLLAPPER DDATVEQAET PAAKRVRPLK SLFMQGFLTN VLNPKVVLFF LSFFPQFVDP HAAHKALAFL ALGAVFIVMS TIWNSLVAWV AASVTRRVAG KPGIKRWLDR VVGTAFIGLG ARLAFTTR
|
| |