Gene Rpic12D_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3350 
Symbol 
ID8021035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3534366 
End bp3535136 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID644832144 
Productproline rich signal peptide protein 
Protein accessionYP_002983286 
Protein GI241664926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTCA TCCTTCGCCC ATCGATCCGG CTGCTGCAAA CCCGGTTCCG GCAGATTCTG 
CAACGGCTGG TCGCGCTGGT CGCATTGGGC ATGCTGCTTT GGTGGCCGCT CGCGGCGCCT
GCACAGTCCA TCGAAATCAA CCGGGCACAG CTCGAATACG CCGACGGCGG CTGGAACCTG
TCGGCCGATT TCGATTTCGA CCTGCCCAGC AACCTCGAAG ACGCGGTGAA CAAGGGCATC
GCGCTCTACT TCCTGGTCGA ATTCGAACTG ATCCGCCCAC GCTGGTATTG GTTTGACGAT
CACGCCATCA GCGCCACGCG CGTGGTGCGG CTGTCGTATC ACCCGCTCAC ACGCCAGTAC
CGCGTGTCGA CCGGCGGCCT GCAGGTGCCA TTCTCGCGAC TGAAAGACGC CGTCGACTTC
ATGCAGCACG TGCGCGGCTG GCGTGTGTTC GAGCAGCGCG CCGTCAAGGC CGGCGAAACC
GTGCAGGCCG AAGTGCGCAT GCGCCTGGAC GTGACGCAGC TGCCCAAGCC GTTCCAGATC
AACGCAGTCA ATACGCGCGA CTGGAATCTC AGCTCCGAGT GGAAGCGCTT CAACCTGCTG
GTGCCGAACG AGCCTCCGCC GGCCCCGTCG CCCGCGCCCG CTGCGCCACC GCCCAGCGCA
CCGGCTTCCA CGCCGCCGGC TTCCGGCTCG TCCGGTCTGT CGCCCAATCC GGGCTGGGGG
ATGAGCGCCG GCCCGTCCAG CGCAGGCACG TTGCTGGCGC CCGCCAAATG A
 
Protein sequence
MTVILRPSIR LLQTRFRQIL QRLVALVALG MLLWWPLAAP AQSIEINRAQ LEYADGGWNL 
SADFDFDLPS NLEDAVNKGI ALYFLVEFEL IRPRWYWFDD HAISATRVVR LSYHPLTRQY
RVSTGGLQVP FSRLKDAVDF MQHVRGWRVF EQRAVKAGET VQAEVRMRLD VTQLPKPFQI
NAVNTRDWNL SSEWKRFNLL VPNEPPPAPS PAPAAPPPSA PASTPPASGS SGLSPNPGWG
MSAGPSSAGT LLAPAK