| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3349 |
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| Symbol | |
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| ID | 8021034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3531898 |
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| End bp | 3534369 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832143 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002983285 |
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| Protein GI | 241664925 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCG ATCGCAGCTA CAAGCGGCTG CTCTATCAGG TGGTGGCGGG CACCATCGTC
TTTCTGGCGA TCGTGCTGGT GGGGCTGCTG GCCGCCGCAT CGGCCAACAC AGAATTCTTC
GACCGGTATT TCACGCTGCT CTACAAGGTC AACCTCGTCA TCGGGGTGCT GCTGGTGGTG
ATCATCGGCG GGCTGATGCT GGCGCTCGCG CTGCGCGCGC GGCGCGGCAA GTTCGGCACG
CGGCTGATGA CCAAGCTGGC GGTGTTCTTT GGCGTGGTGG GCGTCCTGCC CGGCGTGCTG
ATCTATCTGG TGTCGCTGCA GTTCGTGTCG CGCAGTATCG AGTCGTGGTT CGACGTGAAG
GTCGAGTCGG CGCTGGAGGC CGGCCTGAAC CTCGGGCGGT CCACCATGGA CACGGCGCTG
GCCGATCTGC AGAACAAGGG ACGCCTGATC GCCGAGCAGG TAGGCGACGG GTCCGCGTCG
GCCACGGCCA TCACGCTCAA TCGATTGCGC GAGCAGTTTG GCGTGCAGGA GGCGACCATC
TTCACGGCCA GCGGGCGCGT GATCGCCACG GCGTCAAACA CTTATGACAC GCTGGTGCCA
AACCTGCCCG ACCAGGCCGT GCTGGAGCAG GCCCGCGCGC CGGGCGGCTA TGCCAGCCTG
GAGGGCGGCA GCGATACGGA AACCGATAGC GCCTCCGCGC CCGCCGCTTC GGCCCCGGCC
GCGCGCAACG GCAGCCGCCG CAGCGATCTG TACCAACTGC ATGTCGTGGT GGCGCTGGGT
ACGTCATCGC GCGAAGAACC GAGCCTCGGG CTGAGCACGC CGGCACGCAA ATGGGCCGGC
ACCGGTTTGC TCGCAGACCG CCGGCCGGAA GATGGCAGCA GCACCTCGCG TGGCTTCGGC
CTGATTGGAG AGAGCGGCCG CGAAGAACGC TTCCTGCAGC TCGTGCAGCC GGTGCCGCAG
GCGCTTGCCC GCAATGCAGA CGCTGTCCAG CGCGCGTACC AGGAATATCA GGAGAAAGCG
CTCGGCCGCA CCGGTCTGCG AAAGATGTAC ATCGGCACGC TCACGCTCAC GCTGTTCCTG
GCGGTGTTCA TCGCGGTGAT GCTCGCGCTG CTGCTCGGCG CGCAGCTGGC ACGGCCACTG
CTAATGCTGC TCCAAGGCAC GCGCGAAGTG GCCGAGGGCG ATCTCTCCCC CAAGCGGGAA
CTGCATACGC GTGATGAACT GGGTGTACTC ACCCAGCAGT TCAACCAGAT GACGCGGCAG
TTGGCCGACG CGCGCCGCGC CGTCGAGCAG AATCGCGCGG CACTCGAGCA ATCGAAGGCC
TATCTTGAGA GCGTGCTGAC CAACCTGACT GCGGGCGTCT TCGTGTTCGA CCATCGCTTC
GTGCTGCTGA CCGCCAACCC GGGTGCCGAG CGCATCTTCA AACAGCCCTT CGGCGCGTGG
GTCGGGCAGG CGCTGACCAG CATCACGCCG GTGGCCGCCT TCGCGCCGGT GGTCGAACAG
GCCTTTGCCG AACAAGACGC CAGCACGGCT GCCGGCGGCG CAGTGGCCCA CTGGCAGAAG
CAGGTCGAAA TTCCGCTCGA AGACGAAGAC GAGCCGCTCA CGCTGCTGGT GCGCGGCACG
CGCCTGCCCG GCCCTTCAGT GGGCGCGCAC GGCACCGAGC GCGGCTATGT GGTGGTGTTC
GACGATATCT CCGACGTGAT CTCGGCGCAG CGCTCGGTGG CGTGGGGGGA GGTCGCGCGG
CGCCTCGCGC ACGAGATCAA GAATCCGCTC ACGCCCATCC AGCTCTCTGC CGAGCGCCTG
GAGATGAAGC TCTCGCCCAA GTTGTCGGAC ACCGACGCCG AAGTGCTGCG GCGCGGCGCC
ACCACCATCG TCAACCAGGT GGCGGCGATG AAGCGCATGG TCGATGACTT CCGGGACTAC
GCCCGCACAC CGCCGGCCAT GCTGCAGGAG CTGGATCTGA ACGCGCTGGC CGCCGAGGTG
CTGCACCTGT ACGGCATCGA TCACCCTGAC CGCCGCGACC ACCCCGTCAT CGAGGCCAAG
CTGGGCGCCA ATCTGCCGCT CATCAAGGGC GACCCGACGC AACTGCGCCA GGTCATCCAC
AACCTGCTGC AGAATGCGCA GGACGCCGTG GCCGAGAATG AAGCGGCCGG GCGACCCGCT
CCGCATGTCA TGTTGCAAAC TGACACGGTA GAATACGACG ACGCCTCGGG CGCGCGGCGA
CAGGCCGTGC GGCTTGTGAT CGCGGACAAC GGCGGCGGGT TTTCTTCCCG CATCCTCAGT
CGCGCCTTCG AGCCGTACGT TACGACCAAA GCCAAGGGCA CAGGATTGGG CTTGGCCATG
GTGAAGAAGA TCATGGACGA GCACGGGGCG CGCATCGAAT TGCGCAACCG CCAGTCCAGC
ACAACATCGG GCACATCGGG TACCGACACC GTCGGTGCCC AGGTTTCCAT ACTGTTCGTA
AAACTCGCGT AG
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| Protein sequence | MIFDRSYKRL LYQVVAGTIV FLAIVLVGLL AAASANTEFF DRYFTLLYKV NLVIGVLLVV
IIGGLMLALA LRARRGKFGT RLMTKLAVFF GVVGVLPGVL IYLVSLQFVS RSIESWFDVK
VESALEAGLN LGRSTMDTAL ADLQNKGRLI AEQVGDGSAS ATAITLNRLR EQFGVQEATI
FTASGRVIAT ASNTYDTLVP NLPDQAVLEQ ARAPGGYASL EGGSDTETDS ASAPAASAPA
ARNGSRRSDL YQLHVVVALG TSSREEPSLG LSTPARKWAG TGLLADRRPE DGSSTSRGFG
LIGESGREER FLQLVQPVPQ ALARNADAVQ RAYQEYQEKA LGRTGLRKMY IGTLTLTLFL
AVFIAVMLAL LLGAQLARPL LMLLQGTREV AEGDLSPKRE LHTRDELGVL TQQFNQMTRQ
LADARRAVEQ NRAALEQSKA YLESVLTNLT AGVFVFDHRF VLLTANPGAE RIFKQPFGAW
VGQALTSITP VAAFAPVVEQ AFAEQDASTA AGGAVAHWQK QVEIPLEDED EPLTLLVRGT
RLPGPSVGAH GTERGYVVVF DDISDVISAQ RSVAWGEVAR RLAHEIKNPL TPIQLSAERL
EMKLSPKLSD TDAEVLRRGA TTIVNQVAAM KRMVDDFRDY ARTPPAMLQE LDLNALAAEV
LHLYGIDHPD RRDHPVIEAK LGANLPLIKG DPTQLRQVIH NLLQNAQDAV AENEAAGRPA
PHVMLQTDTV EYDDASGARR QAVRLVIADN GGGFSSRILS RAFEPYVTTK AKGTGLGLAM
VKKIMDEHGA RIELRNRQSS TTSGTSGTDT VGAQVSILFV KLA
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