Gene Rpic12D_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3345 
Symbol 
ID8021029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3527949 
End bp3529304 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content68% 
IMG OID644832138 
Producthypothetical protein 
Protein accessionYP_002983281 
Protein GI241664921 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGT CCACCACATC CGTCTTCCAC CGCGACCCGC GCAAGACGCT GCCCACCGCA 
GTCGGCGGCG AGGGCATGAC CCTCATCGAC TCTGACGGCA AGCGTTACCT CGACGCCTGC
GGCGGCGCCG CCGTTTCGTG TCTCGGCCAC GGCCACCCGC GCGTGGTCGA TGCCATCTGC
AAGCAGGTGC GCGCGCTGGC GTATGCGCAC ACGTCTTTCT TCACCACGGA CGTGGCGGAA
GAACTCGCCG CGCGCCTGGC CGCTGCGGCG CCGGGCGATC TGGACCACGT GTATTTCGTC
TCCGGCGGTT CGGAAGCAAT CGAAGCGGCG CTGAAACTCG CACGCCAATA CTTCGTCGAG
ATCGGCCAGC CGCAGCGCCG GTACTTCATC GCGCGGCGTC AGAGCTATCA CGGCAACACG
CTGGGCGCGC TGGCGATTGG CGGTAACGCA TGGCGCCGCG AGCCGTTCCT GCCGCTGCTG
GTGCCGGCTC ACCATGTTTC GCCGTGCTAT GCGTATCGCG AGCGCCTGGA TGGCGAGAGC
GACGCGCAAT ACGTGCAGCG CCTGGCAGAC GAGCTGGACG CGAAGATCGT CGAACTCGGC
GCAGAAAATG TCGCGGCCTT CGTCGCCGAA ACCGTGGTGG GCGCCACGGC CGGCGCGGTG
CCGCCGGTGG GCGATTACTT CCGCAAGATG CGGGCCGTGT GCGATCGCCA CGGCGTGCTG
CTGCTGCTCG ATGAGGTGAT GTCCGGCATG GGACGCACCG GCTACCTCTT CGCATGCGAG
GAAGACGGCG TGGTGCCTGA CATGATCGCC ATTGCCAAGG GCCTCGGGGG CGGGTATCAG
CCGATCGGCG CAACGCTGGT GAACCGCCGC ATTGTCGACG CGATCACGAA CGGCAGCGGC
TTCTTCCAGC ATGGCCACAC CTACATCGGC CACGCCACGG CATGCGCCGC GGCGCTGGAA
GTGCAGAAGG TCATCGCAGA AGAGAACCTG CTCGCCAATG TGCAGGCGCG CGGCGAACAA
CTGCGTGCAA CGCTGCGTGC GCGCTTTGCC GACCACGCAC ATGTGGGCGA CGTGCGCGGC
CGCGGGCTGT TTGTCGGCGT GGAACTGGTG GCCGATCGCG CCACCAAGGC GCCGCTGCCG
CCTGCCCGCA AGACACACGC GCGCGTGAAG GCCGAAGCGA TGCAGCGCGG CCTGATGGTC
TATCCGATGG GCGGCACGAT CGACGGTCAG CGCGGCGACC ACATCTTGCT CGCACCGCCG
TTCATCGCCA CCGCGCAGGA CATCGACGCG ATCGTCGAAC GCCTGGGCGA TGCTGTTGAC
GCCGCCACCA CCGCCACGCT GGAGGCCGCG TGGTGA
 
Protein sequence
MTPSTTSVFH RDPRKTLPTA VGGEGMTLID SDGKRYLDAC GGAAVSCLGH GHPRVVDAIC 
KQVRALAYAH TSFFTTDVAE ELAARLAAAA PGDLDHVYFV SGGSEAIEAA LKLARQYFVE
IGQPQRRYFI ARRQSYHGNT LGALAIGGNA WRREPFLPLL VPAHHVSPCY AYRERLDGES
DAQYVQRLAD ELDAKIVELG AENVAAFVAE TVVGATAGAV PPVGDYFRKM RAVCDRHGVL
LLLDEVMSGM GRTGYLFACE EDGVVPDMIA IAKGLGGGYQ PIGATLVNRR IVDAITNGSG
FFQHGHTYIG HATACAAALE VQKVIAEENL LANVQARGEQ LRATLRARFA DHAHVGDVRG
RGLFVGVELV ADRATKAPLP PARKTHARVK AEAMQRGLMV YPMGGTIDGQ RGDHILLAPP
FIATAQDIDA IVERLGDAVD AATTATLEAA W