Gene Rpic12D_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3335 
Symbol 
ID8021019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3518126 
End bp3518956 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID644832128 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_002983271 
Protein GI241664911 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATC GTCAATTCAG TTTCGAATTC TTCCCGCCCA AGACGGCGGA AGGCGCCGAG 
AAGCTGCGCA ACACGCGCGC GCAGCTTTCG CCGCTCAAGC CGCGCTTCAT CTCCGTGACG
TTCGGCGCGG GCGGCACCAC GCAACAGGGC ACGCTCGACG CCGTGGTGGA AATCCAGCGC
GAAGGCATCG AGGCGGCGCC GCACCTGTCG TGCGTGGGGT CGTCGCGCGA GAGCATCCGC
GGCATTCTCA ATACGTATCG CGAACACGGC ATCCGCCGCA TCGTCGCGCT GCGCGGCGAC
ATGCCCTCTG GCATGGGCGA GATCGGTGAA TTCCGCTTCG CCAACGAGCT GGTCGAGTTC
ATCCGCCAGG AAACCGGCGA GGCATTCCAC ATCGAGGTGG CGGCGTATCC GGAATACCAC
CCGCAGTCGC GCTCCGCCCG GCACGATCTC GAAAACTTCG CCCGCAAGGT GAAGGCCGGT
GCGGACTCCG CCATCACGCA ATACTTCTTC AACGCCGACG CGTATTTCCA GTTTGTCGAC
GACGCACGCA AGCTCGGCGT GGACGTGCCC ATCGTGCCCG GCATCATGCC GATCACGAAT
TCGTCGCAGC TGATGCGCTT TTCCGAGATG TGCGGTGCGG AAGTGCCGCG CTGGATCGCC
AAGCGCCTTG AAGGCTTTGG CGACGACCGT GAATCGATCC GCGCGTTCGG CCTGGACGTG
GTGACGGCCA TGTGCGACCG CCTGCTGCAG GGCGGCGCGC CGGGCCTGCA TTTCTACACG
CTCAATGCCG CCGGCTCTAC GCGAGCGATC TGGCAGCGTC TGGGCTTGTA A
 
Protein sequence
MQDRQFSFEF FPPKTAEGAE KLRNTRAQLS PLKPRFISVT FGAGGTTQQG TLDAVVEIQR 
EGIEAAPHLS CVGSSRESIR GILNTYREHG IRRIVALRGD MPSGMGEIGE FRFANELVEF
IRQETGEAFH IEVAAYPEYH PQSRSARHDL ENFARKVKAG ADSAITQYFF NADAYFQFVD
DARKLGVDVP IVPGIMPITN SSQLMRFSEM CGAEVPRWIA KRLEGFGDDR ESIRAFGLDV
VTAMCDRLLQ GGAPGLHFYT LNAAGSTRAI WQRLGL