Gene Rpic12D_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3333 
Symbol 
ID8021017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3516291 
End bp3517715 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content63% 
IMG OID644832126 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_002983269 
Protein GI241664909 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG TCACCGAACT GAAACACGAT TACCTCGTCG CCGACATCAA GCTGGCCGAC 
TGGGGCCGTA AGGAAATCGC CATTGCCGAG ACCGAAATGC CCGGTCTGAT GGCGATTCGC
GAGGAATTTG CCGCGAGCCA GCCGCTCAAG GGCGCCCGCA TTGCCGGCTC GCTGCACATG
ACGATCCAGA CCGCCGTGCT GATCGAGACG CTCAAGGCAC TCGGCGCCGA CGTGCGCTGG
GCCTCGTGCA ACATCTTCTC GACGCAGGAC CACGCTGCCG CCGCGATTGC CGCAACGGGC
ACGCCGGTGT TTGCGTTCAA GGGCGAATCG CTCCAGGAAT ACTGGGACTT CACCCACCGC
ATCTTCGAAT GGGCTGACGG CGGCACCCCC AATATGATCC TGGACGACGG CGGCGACGCA
ACGCTGCTGC TGCATCTGGG CGCCAAGGCC GAGAAGGACG CCTCCGTCCT TGCCAATCCG
GGCAGCGAAG AAGAAACCTT CCTGTTTGCC GCCATCAAGG AAAAGCTGTC CAAGGACGCA
ACGTTCTACA GCCGCAACCT CGACGCCATC AAGGGCGTGA CCGAAGAAAC CACCACGGGC
GTGCACCGCC TGTACCAGAT GGCCCAGCGC GGCGAACTGC GCTTCCCGGC CATCAACGTC
AACGACTCGG TTACGAAGAG CAAGTTCGAC AACCTGTATG GCTGCCGTGA ATCGCTGGTC
GACGGCATCA AGCGCGCCAC CGACGTGATG ATCGCTGGCA AGGTTGCGGT CGTGGCCGGC
TACGGCGACG TGGGCAAGGG CTCGGCACAG GCACTGCGCG CGCTGTCGGC CCAGGTGTGG
GTGACCGAGA TCGACCCGAT CTGCGCGCTG CAGGCCGCCA TGGAAGGCTA CCGCGTGGTC
ACGATGGACT ACGCCGCCGA GCACGGCGAC ATCTTCGTGA CCTGCACGGG CAACTACCAC
GTCATCACGC ACGACCACAT GGCCAAGATG AAGGACCAGG CCATCGTCTG CAACATCGGC
CACTTCGACA ACGAGATCGA CATCGCCTCC GTCGAGAAGT ACCAGTGGGA AGAGATCAAG
CCGCAGGTCG ATCACGTGAT CTTCCCCGAC GGCAAGAAGA TCATCATCCT GGCCAAGGGC
CGCCTGGTGA ACCTGGGCTG CGCTACGGGC CACCCGTCGT ACGTGATGAG CAGCTCGTTC
GCGAACCAGA CCATCGCGCA GATCGAACTG TGGACCGAAG CGGTGAAGGG CTCGAACAAG
TATCCGGTGG GCGTCTACAC GCTGCCCAAG CACCTGGACG AGAAGGTCGC GCGCCTGCAG
CTGAAGAAGC TGAATGCGCA ACTGACCGAG CTGACGGACC AGCAAGCTGC CTACATCGGC
GTGAGCAAGG AAGGCCCGTA CAAGGCTGAC CACTACCGCT ACTAA
 
Protein sequence
MNAVTELKHD YLVADIKLAD WGRKEIAIAE TEMPGLMAIR EEFAASQPLK GARIAGSLHM 
TIQTAVLIET LKALGADVRW ASCNIFSTQD HAAAAIAATG TPVFAFKGES LQEYWDFTHR
IFEWADGGTP NMILDDGGDA TLLLHLGAKA EKDASVLANP GSEEETFLFA AIKEKLSKDA
TFYSRNLDAI KGVTEETTTG VHRLYQMAQR GELRFPAINV NDSVTKSKFD NLYGCRESLV
DGIKRATDVM IAGKVAVVAG YGDVGKGSAQ ALRALSAQVW VTEIDPICAL QAAMEGYRVV
TMDYAAEHGD IFVTCTGNYH VITHDHMAKM KDQAIVCNIG HFDNEIDIAS VEKYQWEEIK
PQVDHVIFPD GKKIIILAKG RLVNLGCATG HPSYVMSSSF ANQTIAQIEL WTEAVKGSNK
YPVGVYTLPK HLDEKVARLQ LKKLNAQLTE LTDQQAAYIG VSKEGPYKAD HYRY