| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3324 |
|---|
| Symbol | |
|---|
| ID | 8021008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3503899 |
|---|
| End bp | 3506292 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644832117 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002983260 |
|---|
| Protein GI | 241664900 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCC CTGAACAGGC TCTGCCCGAA ACTACCGTCA CCGCCCGCCG CCGCTCTTTC
TACGGCATCA AGGTGACGGA CATCACCCTA CCCGGCAGCC CATGCCGCAC CGTCGTCCAC
CCCGCGCCAC TGCCCGGCGT CATCATCTTC GTCCATGGCG TCAACTCCAC CGGCGAATGG
TTTGATGCCG CAGAGGAAGG CCTTTGCAAG GGGCTTAATG CCCGCCTGCA ACGCAACGAC
GAACAGGTCG CCTATCCCAA GGAGAGTGGC AAGCTTCGCC CCATGCGCTA TACAGCCGAA
TTGACGGAAG ACGGCTATAT ACGCCGCGAC CTCAAAGCCA ACACCTTCAT TGAACCGGGC
AGCGGCACCA GCCCCGTCAT CCGTTTTCGC TGGGGCTACA AAGCCAGCAG CGAGGACGTC
GTCCAGGAAG ACGGCACCAT CCGCAATGAG CTTGCCAGCG TGGGTGGCAA TATCCTGCTC
GACGAGAAAA ACGCCTGGGG CGGCGGTCCG TTCGTCAATG GCGCCTCCGC TCTGCCGGAT
CTGTTCGGCA AGGGCACCGA CAGCGAAGTG TTGGGCGGTC TGTTTGAGCT CCAGCACCTG
CAAACCAGCG ACCGTCAGAT CTACAGCGCG CCCACGCGCC ACTACCAGGC CTTTGCCGCG
TGGCGGTTAG CCAAGCTGGT CGCTCGCATC CGGGAGTTAC ACCGCGACAT TTTCGAACGC
GATTGTCCCA TCACCGTCGT CTGCCACAGC CAGGGCAACA TGGTGGGCTT GGCTTCTGCC
TACTTCGGCG CCAACCACCG CGAGTTCCAA TCATTGGGCG TAGCCGACAC CTACGTCCTC
GCCAACCCGC CATACAGCCT GCGTGGTAGC CGCCTGGATA ACTTCAGCCA ATTCGACGGC
GCAGGCCGCG TTACCTACGA CGCGCGCGTT GCCGGCCTCA AGGGCTTCTT CAACATCGTG
CGCCACTTCC AGGCCCGGGC CCAGCACTAC AGCCACCACG CCGTGGACCA GCTCGGATTC
AACGCGTGCC CCCAGAATGG CGACACCCCG CGCACTGCCG CCCAGGACAG CGCAGACCAC
CAGACCCGCG GGCGCGTCTT CCTCTATTGC TGCCCGCACG ACCGCGTCAT CTCCGTCTCA
CCCGTCCAAG GCATGGGCTG GCTTGGCTTG AACGACAAGG ATGTGCAAGC CACCGGGGCA
CAGGGCATTC TGTTCCAACG CGTCTGGGCG CAAACCAAGC CGGGCACGCC GTACAAGGTG
GGTGCAGAAC CGGGCTACCG CTACCGTTAT TGGCACGACA CCATCGGCGC CACGCCGGCC
GATGTGGGCA GCGGCTGGGA TGACACCGCC GGCACCTTCA AACCGAGGAA CACCAACCCC
ACCATCTGGA CGCCGTCCCC TGACACCGCG GGTGTTTCCT TCGCCAGAAT CTGGGGCGAT
TCGCGCAAGA GCATTTGGGG CAAGCTTGTC GCCAGCGCTG CCGGCGTTCC GATCCAAGCC
CTCATGTGGG GTGGCCAAGC CGTCAAGGGC GCCACCAACG TCAATGCCGA CCCAGCGGAT
GACTGGACGG TGCTCGTCAA CGCCCCCAAG GTGCCAAGCG GTGGCATCGT ACCCCAGGCC
GTCTACCTGC CGCACGGCGA GCCTCGACCC GGCGAGATCT CGCATCCGGA TGGCGTGCGC
ACCATGGGCC CCTTCAACCA GCACAAGGAA TCGGCCAGCG ATGCACTGAA CCGCAAGCGG
AGCATCCCTG AAGGGCAGTT CGACCCCTAC GCCGAGCAGC GCAAGAGCGG CCGCGGCAAC
GCCACCAGCG AAGCCGCCAT GCGCTACGAC CAGAACGCCG GGGTGCGCCA GCGCGCGCGG
CGCGAAATCT ACAACGATGA CGGCACCGCC AGGAAGGGCG TGCCCTTTGC GGAAGGCGAT
GTCGAGAAGA TGAACGCCGC ACAACACCAC ACCTTGCGTG GCACGAAGTT CGGCGCTTTC
GAACAGCAAG AGCGCACGGC CTTGATGAAG GACGGCGAAG ACGCGCAGGC CACCAACCAC
TCCACCATCC TCACCAACGC CATGCATGCG GAACATGTGC TCGCCTATGA CGTGGACGTG
GGCCTGTGCC ACTTCGATGA GCTGCTGATG AACCAGTTGC GGCGGATGGC GGATTGGCGG
TGGTGCGAGC CAGAAAAGAC TGATGAATAC CCGGCGGGAC GCGACCGCAA GAAAGACAGC
GAGTTCACCT ACTACAACAC GAAAGGAGCC CTCTATCAGG ACGGCGCGTT GGCCCAAAAC
AAAGATCTCG CCGCCGCCAA GGGTGCCGTC AGGGCTATAG GCATTGACGA CGCGCGTAAT
TCAAGGCGCC TCGATGCGCA TCTCATGTTG CCACGCGGAC CTCACCACGC TTGA
|
|---|
| Protein sequence | MTIPEQALPE TTVTARRRSF YGIKVTDITL PGSPCRTVVH PAPLPGVIIF VHGVNSTGEW
FDAAEEGLCK GLNARLQRND EQVAYPKESG KLRPMRYTAE LTEDGYIRRD LKANTFIEPG
SGTSPVIRFR WGYKASSEDV VQEDGTIRNE LASVGGNILL DEKNAWGGGP FVNGASALPD
LFGKGTDSEV LGGLFELQHL QTSDRQIYSA PTRHYQAFAA WRLAKLVARI RELHRDIFER
DCPITVVCHS QGNMVGLASA YFGANHREFQ SLGVADTYVL ANPPYSLRGS RLDNFSQFDG
AGRVTYDARV AGLKGFFNIV RHFQARAQHY SHHAVDQLGF NACPQNGDTP RTAAQDSADH
QTRGRVFLYC CPHDRVISVS PVQGMGWLGL NDKDVQATGA QGILFQRVWA QTKPGTPYKV
GAEPGYRYRY WHDTIGATPA DVGSGWDDTA GTFKPRNTNP TIWTPSPDTA GVSFARIWGD
SRKSIWGKLV ASAAGVPIQA LMWGGQAVKG ATNVNADPAD DWTVLVNAPK VPSGGIVPQA
VYLPHGEPRP GEISHPDGVR TMGPFNQHKE SASDALNRKR SIPEGQFDPY AEQRKSGRGN
ATSEAAMRYD QNAGVRQRAR REIYNDDGTA RKGVPFAEGD VEKMNAAQHH TLRGTKFGAF
EQQERTALMK DGEDAQATNH STILTNAMHA EHVLAYDVDV GLCHFDELLM NQLRRMADWR
WCEPEKTDEY PAGRDRKKDS EFTYYNTKGA LYQDGALAQN KDLAAAKGAV RAIGIDDARN
SRRLDAHLML PRGPHHA
|
|---|
| |