| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3314 |
|---|
| Symbol | |
|---|
| ID | 8020998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3492249 |
|---|
| End bp | 3493157 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644832107 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002983250 |
|---|
| Protein GI | 241664890 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTC CCGCGCGCAC GTGGCTGCTG GCCGCGCTTG CCGTTCCCGC TGCTGTTTCC
GCCGCATTCT TCTCACCCGA CGTTGCTGCT GCCTCCCCGA CGCTCGATCG CATCCGCGAC
TCCGGCACGG TGCATGTGGG GTATCGGGAA GACTCCATTC CGTTTTCGTA TCTCGATGGC
ACCAAGCCGG TCGGCTACGC CATCGACATC TGCTCGCGGC TGATCGACTC GCTGCGCACG
TCGCTCAAGC GCCCCGACCT GAAGGTGCAG TACGTGCCCG TCACGGCTGC CAACCGTCTG
GACGTGATCG CCACCGGCAA GGCCGATCTT GAGTGCGGCT CGACCAACAA CTCGCCGGAG
CGCCGGCAGA AGGTGGCCTT CACGATTCCG CACTACATCA CCAAGGGGCG CATGCTGGTG
AAAGCAAACT CGCCGATCCA GCAATGGGAA GACCTGAACG GCAAGACGGT GGTGGCCGCG
CGCGGATCGA CCAATGCCGA CCTCGCACGC AAGCTCAACG AGACGGGCAT GACGATGCAG
GTGGTGGATG CAAATGACTT GCGCAGCGCC TTCGCCATGC TGACCGACGG TCGCGCCCAG
GCCTTCGCGG GTGACGACAT CCTGCTCTCG GGCATGCGCG CCATGGCCAA GAACCCGGCC
GATTACCGCC TGGCGGGCAA GACGCAGCTC GTGTCGTCGT ACGCGATCAT GCTGAGCAAG
CAGGACCCGG AGTTCAAGAA GCTGATCGAC CAGTCGATGA CGCGGCTGAT TGTCGACGGC
GAGGTGCCGA AGCTCTACAA GAAGTGGTTT CAGCAGCCGA TTCCGCCGAA TGGGGTGAAT
CTGGATGTGC CGATGAGTTA TTTGCTGCGG GATTCGTTTA ATACGCCTAC GGATAGTGCG
GGGAACTGA
|
|---|
| Protein sequence | MSFPARTWLL AALAVPAAVS AAFFSPDVAA ASPTLDRIRD SGTVHVGYRE DSIPFSYLDG
TKPVGYAIDI CSRLIDSLRT SLKRPDLKVQ YVPVTAANRL DVIATGKADL ECGSTNNSPE
RRQKVAFTIP HYITKGRMLV KANSPIQQWE DLNGKTVVAA RGSTNADLAR KLNETGMTMQ
VVDANDLRSA FAMLTDGRAQ AFAGDDILLS GMRAMAKNPA DYRLAGKTQL VSSYAIMLSK
QDPEFKKLID QSMTRLIVDG EVPKLYKKWF QQPIPPNGVN LDVPMSYLLR DSFNTPTDSA
GN
|
|---|
| |