Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3295 |
Symbol | |
ID | 8020979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3477505 |
End bp | 3478341 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644832090 |
Product | hypothetical protein |
Protein accession | YP_002983233 |
Protein GI | 241664873 |
COG category | [R] General function prediction only |
COG ID | [COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization |
TIGRFAM ID | [TIGR03214] putative allantoin catabolism protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAA CCACGTATTA CGCGCCGCAT GGCGGCCATC CGCCGCAGAC GGATCTGCTG ACCGATCGCG CGATGTTCAC CGAGGCGTAC GCGGTGATCC CCAAGGGGGT GATGCGCGAC ATCGTCACGA GCTGGCTGCC GTTCTGGACC CACACGCGCC TGTGGGTGAT CGCCCGCCCG CTCTCGGGCT TTGCCGAGAC CTTCTCGCAG TACATCGTTG AAGTGAACCC GGGCGGCGGC AGCGACAAGC CCGAGCAAGA CAAGAACGCC GAAGCCGTGC TGTTTGTGGT GGAAGGTGAA GCGGAGCTGA CGCTGCAGGG CAAGAAGCAC ACGCTCACGC CGGGCGGCTA CGCGTTCATT CCGCCGGGCG AGGACTGGAC GCTGCACAAC GTGAGTGACG CCGCGGTGCG CTTCCACTGG ATCCGCAAGC ACTACCAGGT CGTCGATGGC ATTCCCCTGC CGGAAGCCTT TGTGACCAAC GAACAGGACG TCGAGCCGAT CCCGATGCCG GGCACCAACG GCGCCTGGGT GACGACGCGC TTTGTCGACA TGAGCGACAT GCGCCACGAC ATGCACGTCA ACATCGTCAC GTTCCTGCCG GGCGGTGTGA TTCCGTTTGC CGAGACCCAC GTGATGGAGC ACGGTCTGTA CGTGCTTGAA GGCAAGGCTG TCTATCGCCT GAACCAGGAT TGGGTCGAGG TGGAAGCCGG TGATTTCATG TGGCTGCGCG CATTCTGCCC GCAGGCCTGC TATTCGGGTG GCCCCGGCCG CTTCCGTTAC CTGCTGTACA AGGATGTGAA CCGTCACATG AACCTGACGC TGAATCCGTC GCGTTAA
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Protein sequence | MSKTTYYAPH GGHPPQTDLL TDRAMFTEAY AVIPKGVMRD IVTSWLPFWT HTRLWVIARP LSGFAETFSQ YIVEVNPGGG SDKPEQDKNA EAVLFVVEGE AELTLQGKKH TLTPGGYAFI PPGEDWTLHN VSDAAVRFHW IRKHYQVVDG IPLPEAFVTN EQDVEPIPMP GTNGAWVTTR FVDMSDMRHD MHVNIVTFLP GGVIPFAETH VMEHGLYVLE GKAVYRLNQD WVEVEAGDFM WLRAFCPQAC YSGGPGRFRY LLYKDVNRHM NLTLNPSR
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