Gene Rpic12D_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3295 
Symbol 
ID8020979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3477505 
End bp3478341 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID644832090 
Producthypothetical protein 
Protein accessionYP_002983233 
Protein GI241664873 
COG category[R] General function prediction only 
COG ID[COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization 
TIGRFAM ID[TIGR03214] putative allantoin catabolism protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA CCACGTATTA CGCGCCGCAT GGCGGCCATC CGCCGCAGAC GGATCTGCTG 
ACCGATCGCG CGATGTTCAC CGAGGCGTAC GCGGTGATCC CCAAGGGGGT GATGCGCGAC
ATCGTCACGA GCTGGCTGCC GTTCTGGACC CACACGCGCC TGTGGGTGAT CGCCCGCCCG
CTCTCGGGCT TTGCCGAGAC CTTCTCGCAG TACATCGTTG AAGTGAACCC GGGCGGCGGC
AGCGACAAGC CCGAGCAAGA CAAGAACGCC GAAGCCGTGC TGTTTGTGGT GGAAGGTGAA
GCGGAGCTGA CGCTGCAGGG CAAGAAGCAC ACGCTCACGC CGGGCGGCTA CGCGTTCATT
CCGCCGGGCG AGGACTGGAC GCTGCACAAC GTGAGTGACG CCGCGGTGCG CTTCCACTGG
ATCCGCAAGC ACTACCAGGT CGTCGATGGC ATTCCCCTGC CGGAAGCCTT TGTGACCAAC
GAACAGGACG TCGAGCCGAT CCCGATGCCG GGCACCAACG GCGCCTGGGT GACGACGCGC
TTTGTCGACA TGAGCGACAT GCGCCACGAC ATGCACGTCA ACATCGTCAC GTTCCTGCCG
GGCGGTGTGA TTCCGTTTGC CGAGACCCAC GTGATGGAGC ACGGTCTGTA CGTGCTTGAA
GGCAAGGCTG TCTATCGCCT GAACCAGGAT TGGGTCGAGG TGGAAGCCGG TGATTTCATG
TGGCTGCGCG CATTCTGCCC GCAGGCCTGC TATTCGGGTG GCCCCGGCCG CTTCCGTTAC
CTGCTGTACA AGGATGTGAA CCGTCACATG AACCTGACGC TGAATCCGTC GCGTTAA
 
Protein sequence
MSKTTYYAPH GGHPPQTDLL TDRAMFTEAY AVIPKGVMRD IVTSWLPFWT HTRLWVIARP 
LSGFAETFSQ YIVEVNPGGG SDKPEQDKNA EAVLFVVEGE AELTLQGKKH TLTPGGYAFI
PPGEDWTLHN VSDAAVRFHW IRKHYQVVDG IPLPEAFVTN EQDVEPIPMP GTNGAWVTTR
FVDMSDMRHD MHVNIVTFLP GGVIPFAETH VMEHGLYVLE GKAVYRLNQD WVEVEAGDFM
WLRAFCPQAC YSGGPGRFRY LLYKDVNRHM NLTLNPSR