Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3290 |
Symbol | |
ID | 8020974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3473026 |
End bp | 3473463 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832085 |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_002983228 |
Protein GI | 241664868 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCCC TCCTCGACTT CTATCAAAGC AATCCCGCCG CCATCCAGGC GGTCATGGGC CTCGAAAAAG CACTGGGCAG AAGCACGCTG GAAAAACCCC TGACTGAACT CGTGCGTCTG CGCGCCTCGC AAATCAACGG CTGCGCCTAT TGCGTCGACT TGCATACCGC CGATGCGCGC AAGGGCGGTG AAGACGACCG CCGCTTGGCC ACCGTCTCGG TCTGGCATGA AACGCCCTTC TTCACCGACC GCGAACGCGC CGCGCTGGCC TGGACGGAAG CCGTCACCCT CGTCGCAGAA ACGCGCGTGC CCGACGACGT CTGGCAGGCC GTGCGCGCGC AGTTCTCCGA TGCCGAGTTG GTCGACCTGA CGCTGCTGGT GAGCACCATC AACACGTGGA ACCGCCTGGC CATCAGCTTT CGCAAGCTGC CCGCCTGA
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Protein sequence | MEPLLDFYQS NPAAIQAVMG LEKALGRSTL EKPLTELVRL RASQINGCAY CVDLHTADAR KGGEDDRRLA TVSVWHETPF FTDRERAALA WTEAVTLVAE TRVPDDVWQA VRAQFSDAEL VDLTLLVSTI NTWNRLAISF RKLPA
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