Gene Rpic12D_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3290 
Symbol 
ID8020974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3473026 
End bp3473463 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID644832085 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002983228 
Protein GI241664868 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCC TCCTCGACTT CTATCAAAGC AATCCCGCCG CCATCCAGGC GGTCATGGGC 
CTCGAAAAAG CACTGGGCAG AAGCACGCTG GAAAAACCCC TGACTGAACT CGTGCGTCTG
CGCGCCTCGC AAATCAACGG CTGCGCCTAT TGCGTCGACT TGCATACCGC CGATGCGCGC
AAGGGCGGTG AAGACGACCG CCGCTTGGCC ACCGTCTCGG TCTGGCATGA AACGCCCTTC
TTCACCGACC GCGAACGCGC CGCGCTGGCC TGGACGGAAG CCGTCACCCT CGTCGCAGAA
ACGCGCGTGC CCGACGACGT CTGGCAGGCC GTGCGCGCGC AGTTCTCCGA TGCCGAGTTG
GTCGACCTGA CGCTGCTGGT GAGCACCATC AACACGTGGA ACCGCCTGGC CATCAGCTTT
CGCAAGCTGC CCGCCTGA
 
Protein sequence
MEPLLDFYQS NPAAIQAVMG LEKALGRSTL EKPLTELVRL RASQINGCAY CVDLHTADAR 
KGGEDDRRLA TVSVWHETPF FTDRERAALA WTEAVTLVAE TRVPDDVWQA VRAQFSDAEL
VDLTLLVSTI NTWNRLAISF RKLPA