Gene Rpic12D_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3269 
Symbol 
ID8020953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3450161 
End bp3450784 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content62% 
IMG OID644832064 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_002983207 
Protein GI241664847 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.24892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA CAACTCAAGC GCGTCAACCT GTTCAGGCCG ACGTGCCGCA ACAAGGTGGG 
CTGCTGCGTG CGGCGCTGGT GGTGTTTGTT GGGCTGTCGC TCATTACCGG CGTGCTGTAT
CCGGTGGTGG TGACGGGTAT TGGCAAGGCG CTGTTTCCGG CGCAGGCCGG GGGCTCGATC
ATCGAGCGTC ATGGCAAGGC GGTAGGTTCG TCGCTGATTG GGCAGAACTT TGATACGCCC
GAGTATTTCT GGGGGCGGAT CTCGGCGACT GCGCCGAACC CCTATAACGC GCAGGCGTCA
AGCGGATCGA ACCTTGGGCC CAGCAACCCG GCGTTGACGG AGGCGGCTAA GGCACGCATT
GCGGCGCTTA AGGAAGCGGA CCCGACGAAC AGTGCGCCGA TTCCTGCTGA TCTTGTGACG
GCATCCGCCA GTGGGCTAGA CCCGCAGATC AGTCCGGCTG CTGCGGCGTA CCAAGTAGAG
CGTGTGGCCA AGGCTCGCCA CATGTCGCCT GACCTGGTGA AGAAGGTGGT GGCTGAGAAC
ACCAAGGGGC CGGTGCTTGG GGTGTTTGGC GAGCCGGTCG TCAACGTGTT GGAGCTGAAT
CTGGCCTTGG ATGATTTGAA GTGA
 
Protein sequence
MATTTQARQP VQADVPQQGG LLRAALVVFV GLSLITGVLY PVVVTGIGKA LFPAQAGGSI 
IERHGKAVGS SLIGQNFDTP EYFWGRISAT APNPYNAQAS SGSNLGPSNP ALTEAAKARI
AALKEADPTN SAPIPADLVT ASASGLDPQI SPAAAAYQVE RVAKARHMSP DLVKKVVAEN
TKGPVLGVFG EPVVNVLELN LALDDLK