Gene Rpic12D_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3267 
Symbol 
ID8020951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3446107 
End bp3447879 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content63% 
IMG OID644832062 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_002983205 
Protein GI241664845 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.749431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGT TCCTCCTCCA GCTGGCGATC TATCTGGTCG TGCTGCTGGT TTTGGCCAAA 
CCGCTGGGCG CGTATATGAC CGGCGTGTTT GGTGACAAGC CATCGCGCAC GCACTGGCTC
GGCCCCGTCG AGCGGCTGTT CTATCGCGTG GCCGGCGTCA ACCCGAAGGC CGAGATGGGC
TGGAAGCACT ACGCACTGGC CGTCATCGTC GTCAACGTGC TGGGCGCGCT GGCGGTGTAT
GCGCTGCAGC GCGCGCAGCA GTGGCTGCCG CTCAACCCGC AGGGCTTTGG TGCGGTCACG
CCGGATTCGT CGTTCAACAC GGCGGTCAGC TTTGTCACCA ACACCAACTG GCAAGGCTAT
TCGGGCGAAA GCACGATGAG CTATCTCACG CAGATGCTCG GGCTGGCGGT GCAGAACTTC
CTGTCTGCGG CGACGGGCAT TGCGGTGGTG ATTGCGCTCA TCCGCGGTTT TGCGCGCCAC
TCTGCCAACA CCATCGGCAA CTTTTGGGTC GACTTCACGC GCTCGACGGT CTATGTGCTG
CTGCCGTTGT CGATCATCGT GTCGGTGTTC TTTGTCAGCC AGGGCGTCAT CCAGAACTTC
GATGGCTACA AGGAGGTGAC CACCGTCACC GCCACCACGT ACGACAACCC GAAGATGGAT
GCCAACGGCC AGCCGATCAA GGATGCCCAA GGCAACCCCG TCACGGAAAA GGCCACCACG
CAAACGCAGA CTCTGCCGAT GGGTCCGATC GCCTCGCAAG AAGCCATCAA GATGATCGGC
ACCAATGGCG GCGGCCCGTT CAATGCCAAC TCCGCGCACC CGTATGAGAA CCCCAACGCG
CTGACGAACT TCGTGCAGAT GCTGTGCATC TTCATCATCC CGGCGGCGCT GTGCTTTACG
TTTGGCGGCA TGGTGGGCGA TGGCCGGCAA GGCTGGGCCG TGCTGGCTGC GATGACGGTG
CTGTTTGTGG TGCTCGCCGT CTTCCTGGCA TGGGCTGAGC TGCACGCCAA CCCGATGCTC
ACCAACCTTG GCATCGACCA GACCGTGGGC AATATGGAGG GCAAGGAAAC GCGCTTCGGC
ATCGTGGCCT CGTCGCTGTT TGCCACCATC ACCACGGCAG CGTCGTGCGG GGCGGTCAAT
GCCATGCATG ACTCGCTGAC CGCGCTGGGC GGCTTTGTGC CGATGTTCCT GATGCAGCTG
GGTGAAGTGG TGTTTGGCGG TGTGGGCTCG GGCCTGTACG GCATGCTGGT GTACGCCATC
CTGGCCGTGT TCATCGCGGG CCTGATGATC GGCCGCACGC CGGAATACCT CGGCAAGAAG
ATCGAGGTGT TCGAGATGAA GATGACGTCG ATCGCCATCC TCGTCACGCC GCTGCTGGTG
CTGGTGGGCA CGGCCGTGGC CGTGGTGGTC ACGCAGGGCA AGGCGGGCAT CTTCAACCCG
GGCACGCACG GCTTCTCTGA AGTGCTGTAC GCCTTCTCGT CTGCCGCCAA CAACAACGGC
AGCGCGTTTG CGGGCCTGTC TGCCAACACG CCGTTCTACA ACATCGCGCT GGGCATCTGC
ATGTGGCTGG GCCGCTTCTG GATCATCGTG CCGGTGCTGG CGATGGCAGG CACGTTTGCC
GCCAAGAAGC GCCTGCCCGT GACGGCCGGC ACGCTGCCCA CGCATGGCCC GCTGTTTGTG
GTGCTGCTGA TCGGCTCGGT GCTGCTGGTG GGCGCGCTCA CGTACATCCC GGCGCTCGCG
CTAGGCCCCA TTGCAGAGCA TCTCGCCCGC TAA
 
Protein sequence
MNAFLLQLAI YLVVLLVLAK PLGAYMTGVF GDKPSRTHWL GPVERLFYRV AGVNPKAEMG 
WKHYALAVIV VNVLGALAVY ALQRAQQWLP LNPQGFGAVT PDSSFNTAVS FVTNTNWQGY
SGESTMSYLT QMLGLAVQNF LSAATGIAVV IALIRGFARH SANTIGNFWV DFTRSTVYVL
LPLSIIVSVF FVSQGVIQNF DGYKEVTTVT ATTYDNPKMD ANGQPIKDAQ GNPVTEKATT
QTQTLPMGPI ASQEAIKMIG TNGGGPFNAN SAHPYENPNA LTNFVQMLCI FIIPAALCFT
FGGMVGDGRQ GWAVLAAMTV LFVVLAVFLA WAELHANPML TNLGIDQTVG NMEGKETRFG
IVASSLFATI TTAASCGAVN AMHDSLTALG GFVPMFLMQL GEVVFGGVGS GLYGMLVYAI
LAVFIAGLMI GRTPEYLGKK IEVFEMKMTS IAILVTPLLV LVGTAVAVVV TQGKAGIFNP
GTHGFSEVLY AFSSAANNNG SAFAGLSANT PFYNIALGIC MWLGRFWIIV PVLAMAGTFA
AKKRLPVTAG TLPTHGPLFV VLLIGSVLLV GALTYIPALA LGPIAEHLAR