Gene Rpic12D_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3257 
Symbol 
ID8020941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3438274 
End bp3439182 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID644832052 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002983195 
Protein GI241664835 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC TGTTTGCAGC CGTCGCGCTC ATGCTCGCCA TGACGCCCCT TGTGCAAGCG 
CAGGTGAAGC CCTATCCGCC GGGCTTTCGG CACCAGAACA TCCAGACCGA CGGGGCGACG
CTGTTTGTGC GCGTGGGCGG CAGCGGCCCG GCGGTGGTGT TGCTGCATGG CTTTGGCGAT
ACGGGTGACA TGTGGGCACC GCTCGCCGCC GAGCTGGCGC GCACGCATAC CGTGGTGGTG
CCGGATCTGC GCGGCATGGG TTTGTCGTCG CACCCCGAGG GCAGCTATGA CAAGCGCACC
CAGGCCGGCG ACATCCGCGC GGTGCTCACC AAACTGAACA TCGACCAGGC CGATGTGGTG
GGCCACGACA TCGGCACCAT GGTGGCGTTT GCTTATGCGG CGCGCTACCC GGACAAGACC
ACGCGGCTGG TCGTGATGGA TGCGCCCGTG CCCGGTGTGC CGCCGTGGGA GCAGATCGTC
CGCTCGCCCA AGCTCTGGCA CTTCTCGTTC GGCGGCCCCG ATGCCGAGCG GCTCGTCAAA
GGCCGCGAGC GCATCTACCT CGACCGGTTC TGGAATGAGT TTGCCGGCAA CCCCTCCAAG
ATCGACGAAG CCACCCGCGT CCACTACGCC CGCCTTTACG CCAAACCGGG CGCCATGCAT
TCAGCGTTTG CGCAATTCCT GTCGATCCCG CAAGACGCGG AGGACAACCA GAAAGCCATC
GCCACCAAGC TGCCCATGCC GGTGCTCGCC ATTGGGGGCG CCAAGTCCTT CGGCGAGAAC
GAGGCCATCG TCATGCGCAA TGCCGCCACC AACGTGCAGG CGCTGGTGAT TCCGGATGCG
GGGCATTGGT TGATGGAGGA GCAGACGCAG GTTACGGTGG GTGCCGTCGT TAAATTTCTG
GCGCAGTAG
 
Protein sequence
MRKLFAAVAL MLAMTPLVQA QVKPYPPGFR HQNIQTDGAT LFVRVGGSGP AVVLLHGFGD 
TGDMWAPLAA ELARTHTVVV PDLRGMGLSS HPEGSYDKRT QAGDIRAVLT KLNIDQADVV
GHDIGTMVAF AYAARYPDKT TRLVVMDAPV PGVPPWEQIV RSPKLWHFSF GGPDAERLVK
GRERIYLDRF WNEFAGNPSK IDEATRVHYA RLYAKPGAMH SAFAQFLSIP QDAEDNQKAI
ATKLPMPVLA IGGAKSFGEN EAIVMRNAAT NVQALVIPDA GHWLMEEQTQ VTVGAVVKFL
AQ