Gene Rpic12D_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3249 
Symbol 
ID8020933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3431836 
End bp3432885 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID644832044 
Productdienelactone hydrolase 
Protein accessionYP_002983187 
Protein GI241664827 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGGC TCTCGACCGT CGGCTTGTTG CGCCGCCTGT TTCGCGTTGT TTCCGTCATG 
GCGCTGATCT CCGCGCCCGC ATCGGCGCAG CAAATCGTCA GCGATCTCTC GGCACAACCC
ACCGGCCGCA TCCACTTCAA CAGCGTCACC CCCAAGAGCA AATGGGAGCT GGCGCATCGC
AAGTTCGACA AGACGCCGAC GCCCATCTGG GGCACGTTGT ACCTGCCCGA GAACCTGCAG
GGCCCGGTGC CAGCGATGGT GATCTCGCAC GGCTCGGCCG GGCCGCAGCA GAAAGACGTC
GACCGGTGGG TGCGGCTGTT CAACCAGATG GGCATGGCCG CGTTCGTGGT GGATTCGTTT
GGCCCACGCG GCATTGCCAA TACGATGGAC AACCAATCGC AGTTGAACCC CGCCGCCAAC
GACGCCGACG CCCTGTTCGC GCTCAAGCTG CTGAGCACCG ACCCGCGCAT CGACCCGAAG
CGCATCGGCC AGATCGGGTT CTCGCGCGGC GGTGGTGTGT CACTGGACAT GACGCTCGAC
GCGTTCCGCA AAGGCGTCAT CGGTGACGAC ACGCGGTTTG CAGCGCTCAT CGGCTTCTAC
CCCGGGTGCT CGGCGCTCTG GTGGGAGATC CCGCCGCCAC CGCTGACCGG CGCCCCGCTC
ATGCTCGCGC TGGGCGAGAA AGACGACTAC ACACCCGCGC AGCTATGCCG CAACGCCGCG
GAGATCATGC AGCGTGATGG GCAGACCGTC GAGGTGCACG TGTACCCCGG CGCGTATCAC
GACTTCGACA ACACGCGTGC GTACTTCAAG TACTTCCCAG GTGCGACTAC GGCGCGCGAT
TGCCCGCAGA CCCTGATCGA CGTGCAGCAC GATGCGTACT ACCGGCTGCC AGGCGGCGAG
AAGTACGCCA ACCTCCAGGC CATGCAGGCC GACTACACGC GCTGCACCAC CCGGGGTGTC
TCCACTGGCG CCAACCTGGA GCAAGCCAAA CGCGCCGAGG CCGACGTCAA CGCGTTCCTG
GTGAAAGCCA TGGGCCTGTC GCCGCGCTAA
 
Protein sequence
MRRLSTVGLL RRLFRVVSVM ALISAPASAQ QIVSDLSAQP TGRIHFNSVT PKSKWELAHR 
KFDKTPTPIW GTLYLPENLQ GPVPAMVISH GSAGPQQKDV DRWVRLFNQM GMAAFVVDSF
GPRGIANTMD NQSQLNPAAN DADALFALKL LSTDPRIDPK RIGQIGFSRG GGVSLDMTLD
AFRKGVIGDD TRFAALIGFY PGCSALWWEI PPPPLTGAPL MLALGEKDDY TPAQLCRNAA
EIMQRDGQTV EVHVYPGAYH DFDNTRAYFK YFPGATTARD CPQTLIDVQH DAYYRLPGGE
KYANLQAMQA DYTRCTTRGV STGANLEQAK RAEADVNAFL VKAMGLSPR