| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3242 |
|---|
| Symbol | |
|---|
| ID | 8020926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3423162 |
|---|
| End bp | 3424019 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644832037 |
|---|
| Product | protein of unknown function DUF519 |
|---|
| Protein accession | YP_002983180 |
|---|
| Protein GI | 241664820 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2961] Protein involved in catabolism of external DNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGTT ACCGTCACGC CTTCCACGCC GGCAATCACG CCGATGTCCT CAAGCACGCC
GTGCTTGTGC AGATGCTCGA TTACCTCACG CAGAAGGACA AGCCGTTCTG GTACATCGAC
ACGCACGCCG GTGCCGGCCT CTACGCGCTG GATCACGAAT GGGCGCAGAA GAAGGCCGAA
TTCGATACCG GCATCGGCCC CTTGTGGCGT GCGGCCGAAG GCGGCGAAAC GCTGCCGCCG
TTGCTCGATG CGTACCTCGA CCAGGTGCGC GAACTGAACC CGAACGGCGA ACTCCGGCAC
TACCCCGGAT CGCCGTGGCT GGCGTGGCAG ATGCTGCGCG ATGCCGATCG CCTGCGCCTG
TTCGAGCTGC ACAGCTCCGA AATCAAGGTG CTGTCCAACA ACTTCCGCGG TGCAGGCCGC
AAGGTCATGC TGTACGACGG CGACGGCTTT GCCGGCATCA AGGCGATCCT GCCGCCGCCG
CCGCGCCGTG CGCTGGTGCT GATCGATCCG TCCTTCGAAG ACAAGCAGGA TTACGCCCGC
ACCGTGCAGG CCCTGCAAGA CAGCCTGCAA CGCTTTGCCA CCGGCATGTA TGCGGTCTGG
TATCCGCTGG TGCAGCGGCG CGAAGCCGCG CAATTTCCCT CGCGCCTGAA GCAGTTGCGC
CCCAAGGATT GGCTGCACGT CACGCTCACG GTCAGGCACC CGGTCGAGGG CGGCCTGGGC
TTGCACGGCA GCGGCATGTT CATCGTCAAC CCGCCGTGGA CGCTGAAGGC GCAACTGCAG
GAAGCCATGC CCGCGCTGGT GCGCCTGCTC GGCCAGGACG ACGGCGCCAA GTTCATGCTG
GAAGGCGAAT CCAGCTAA
|
|---|
| Protein sequence | MLSYRHAFHA GNHADVLKHA VLVQMLDYLT QKDKPFWYID THAGAGLYAL DHEWAQKKAE
FDTGIGPLWR AAEGGETLPP LLDAYLDQVR ELNPNGELRH YPGSPWLAWQ MLRDADRLRL
FELHSSEIKV LSNNFRGAGR KVMLYDGDGF AGIKAILPPP PRRALVLIDP SFEDKQDYAR
TVQALQDSLQ RFATGMYAVW YPLVQRREAA QFPSRLKQLR PKDWLHVTLT VRHPVEGGLG
LHGSGMFIVN PPWTLKAQLQ EAMPALVRLL GQDDGAKFML EGESS
|
|---|
| |