Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3235 |
Symbol | |
ID | 8020919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3415156 |
End bp | 3415959 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832030 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_002983173 |
Protein GI | 241664813 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATCTC TTCGTTCCGC ATGGGCGGGT GCACCGGCCA TGGAATCTCC GCGACAGTCG GTGCCGATGC TCACCGTGGC CGCCGCGCTG GCGATCATCG TGGCGGCAGG CGGTTGGCTG TCGCATGCGC GCCAGGCACC CGCCGTCGAT GCCACGCAGC TGGAATCGTG GCGCGCAATG GTCGTGCAAG CGATGGAGCC CGAGGCGCTG CAGCAATTGC GTCAGCGCGC ACGCAGCGGC TCCGTGCCGG CGCAGTCAGC GTTGGGCGAA GCCTTGCTCA GCGCGCACGA CGGCACCTTG CGCAACGAAG GGATGCGTTG GCTGGAAACC GCTGCAACAA GCGATGCGCG TGCGCAGTTG TCGCTGGGCA AGGCGCTGCT GCTCGGCACC GGCGGTGTGG AGCGCGACTA TCCGCGCGCC CTGCGCCTGC TGCGTCAATC CGCTGACAAG GGCGACGCGG CCGCGGCGTA CTACCTGGGC GTGATGTATC GTAGCGGCTA CGGCACGGCT GTCGACACAA CACAGGCTGC ACACTGGTTT GATCGTGCTG CCCGCCACGA GATTCCGGCA GCGATGTTCA TGCTGGCGAA TGCCTACCGC GACGGTGATG GTGTGCCACG CGATGAAGCC CGCGCGCTGG CGTTGTACCA GGACGCCGCC GAGCACGAAT TGCCGGAGGC CGTGCAAGCT CTGGCGATGG CGTATCAGAA CGGCGAACTG GGTCTCAAGC GCGACGATGC CGCGTATCAC CAGCAGTGGA TTGAAACGGC ACATGCGCTG AAGCATCCTG CGCTCGCGCC GTAA
|
Protein sequence | MPSLRSAWAG APAMESPRQS VPMLTVAAAL AIIVAAGGWL SHARQAPAVD ATQLESWRAM VVQAMEPEAL QQLRQRARSG SVPAQSALGE ALLSAHDGTL RNEGMRWLET AATSDARAQL SLGKALLLGT GGVERDYPRA LRLLRQSADK GDAAAAYYLG VMYRSGYGTA VDTTQAAHWF DRAARHEIPA AMFMLANAYR DGDGVPRDEA RALALYQDAA EHELPEAVQA LAMAYQNGEL GLKRDDAAYH QQWIETAHAL KHPALAP
|
| |