Gene Rpic12D_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3233 
Symbol 
ID8020917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3413336 
End bp3414160 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID644832028 
Productaldolase II superfamily protein 
Protein accessionYP_002983171 
Protein GI241664811 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGT TTTCGCTTTC GCCCGATTCC GGTTCGGACA TCCAGGCCCA TCGCCCGACC 
TGGTGCGGCC CAAGAGAATG GGGGGCGCGC GTGAAGCTGG CGGCGTGCTA TCGCATCTTT
GCGCAGCTGG GCTGGACCGA ACTCATCTAC AACCACATCA CGCTGCGCCT GCCACCCGAA
GATGGCAGCG CCGACGATGG CGGCCCGCAT TTCCTCATCA ACCCGTTCGG CCTGACCTAT
GCAGAGGTTT GCGCGTCGAA CCTCGTGAAG ATCGACCTGC AGGGCAATGC GCAGCGCGCG
CCGGGTCAGC CGGACTGGCC CGTCAACCCG GCCGGCTTTA CCGTGCATGC CGCCATTCAT
GCGGGTATTC CGGGTGCGCA TTGCGTGATG CACACCCACA CGACCGCCGG CATGGCCGTC
GCCTGCGCGC GCGATGGCCT GTCGATCAGC AACTTCTATG CGGCGCAGTT GCACGGCAAG
GTCGCGTATC ACGACTTCGA GGGCATCACC GTGCATGCCG ATGAAGGGCC GCGCCTGGTC
AAGAATATCG GCGATAAGCC TGCCGTGATC CTGCGCAACC ACGGGCTGCT GGCCTGGGGC
GATTCAATTG CGCGGGCGTT CGCGGTGTTG TGGCTGCTCA ACCGCGCGTG CGAGATCCAG
CTCGCTTCTA CATCGATGGG CCCTGTGCTG GAAATCCCTG AAGCGATTGC GCGCAACTGC
ACGCGCGATT CGTTGCAGTT CAACCCAAAC TTTGGCGCAG GCGAAGATGT GTTTGCGGCC
CTCACCCGCA CCATCGACCG CATCGATTCT TCCTACCGAA CCTGA
 
Protein sequence
MTVFSLSPDS GSDIQAHRPT WCGPREWGAR VKLAACYRIF AQLGWTELIY NHITLRLPPE 
DGSADDGGPH FLINPFGLTY AEVCASNLVK IDLQGNAQRA PGQPDWPVNP AGFTVHAAIH
AGIPGAHCVM HTHTTAGMAV ACARDGLSIS NFYAAQLHGK VAYHDFEGIT VHADEGPRLV
KNIGDKPAVI LRNHGLLAWG DSIARAFAVL WLLNRACEIQ LASTSMGPVL EIPEAIARNC
TRDSLQFNPN FGAGEDVFAA LTRTIDRIDS SYRT