Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3230 |
Symbol | |
ID | 8020914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3410678 |
End bp | 3411217 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832025 |
Product | nuclear protein SET |
Protein accession | YP_002983168 |
Protein GI | 241664808 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCA CGTCCCCTGA TGCCACGCCG GCTCTGGCTG AGTCCTCGCC CGCGACGGAA GCGCCGGCCA AACTGCGGCG CCGCGATCGC ATCGAGGTGC GTGAATCTGG CGTGCACGGA CGCGGCGTCT ATGCCGTGGT CGCGATCGCA CGCGGCAAGA AGATCATCGA ATACAAGGGC GAGCACATCA CGTGGAAGGA GGCACTGCGC CGCCATCCGC ATGACCCGTC CGATCCGAAT CACACGTTCT ACTTCAGCCT GGAAGACGGC AGCGTGATCG ACGCCAAGTT CGGCGGCAAC CGCGCGCGCT GGATCAACCA CGCCTGCAAG CCGAATTGCG AAGCGCGGGA AGAGGATGGC CGCGTGTTCA TTCACGCGCT GCGCGATATC GAACCTGGCG AAGAGCTGTT CTACGATTAC GGCCTCGTCA TCGAGGGCCG GCAGACCAAG GCACTGAAGG AACAGTTCGC GTGCCGCTGC GGCGCCAAGA AATGCCGCGG CACAATGCTG GCGCCGCCCG AGAAGACCAA GAAGAAGTAA
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Protein sequence | MTRTSPDATP ALAESSPATE APAKLRRRDR IEVRESGVHG RGVYAVVAIA RGKKIIEYKG EHITWKEALR RHPHDPSDPN HTFYFSLEDG SVIDAKFGGN RARWINHACK PNCEAREEDG RVFIHALRDI EPGEELFYDY GLVIEGRQTK ALKEQFACRC GAKKCRGTML APPEKTKKK
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