Gene Rpic12D_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3230 
Symbol 
ID8020914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3410678 
End bp3411217 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID644832025 
Productnuclear protein SET 
Protein accessionYP_002983168 
Protein GI241664808 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA CGTCCCCTGA TGCCACGCCG GCTCTGGCTG AGTCCTCGCC CGCGACGGAA 
GCGCCGGCCA AACTGCGGCG CCGCGATCGC ATCGAGGTGC GTGAATCTGG CGTGCACGGA
CGCGGCGTCT ATGCCGTGGT CGCGATCGCA CGCGGCAAGA AGATCATCGA ATACAAGGGC
GAGCACATCA CGTGGAAGGA GGCACTGCGC CGCCATCCGC ATGACCCGTC CGATCCGAAT
CACACGTTCT ACTTCAGCCT GGAAGACGGC AGCGTGATCG ACGCCAAGTT CGGCGGCAAC
CGCGCGCGCT GGATCAACCA CGCCTGCAAG CCGAATTGCG AAGCGCGGGA AGAGGATGGC
CGCGTGTTCA TTCACGCGCT GCGCGATATC GAACCTGGCG AAGAGCTGTT CTACGATTAC
GGCCTCGTCA TCGAGGGCCG GCAGACCAAG GCACTGAAGG AACAGTTCGC GTGCCGCTGC
GGCGCCAAGA AATGCCGCGG CACAATGCTG GCGCCGCCCG AGAAGACCAA GAAGAAGTAA
 
Protein sequence
MTRTSPDATP ALAESSPATE APAKLRRRDR IEVRESGVHG RGVYAVVAIA RGKKIIEYKG 
EHITWKEALR RHPHDPSDPN HTFYFSLEDG SVIDAKFGGN RARWINHACK PNCEAREEDG
RVFIHALRDI EPGEELFYDY GLVIEGRQTK ALKEQFACRC GAKKCRGTML APPEKTKKK