| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3222 |
|---|
| Symbol | |
|---|
| ID | 8020906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3404133 |
|---|
| End bp | 3405134 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644832017 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_002983160 |
|---|
| Protein GI | 241664800 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGA CCCTCGACGC TGCCACCACG GCAGCCCGCT TGCCATATGC CGCCTTGGCC
GATGCCATCG CCCAGGTGTT GCGCGACGCG CGCGCAGGCC GTGCCCAGGC GCCGGCCCGC
CTTGTGATGC CCGTGGCGGG CGGGGGCAGT CTGTTGCTGA TGCCCGCGTG CAACGCCGAC
ATCGCCATCA CCAAGATGAT CACCGTGCAT CCGCACAACC CTGGGCAGGG CTTGCCGGCG
ATCCACGGCG AGGTGGTGGT GATGAACGCC CGCACCGGCG AGCGCCGGCT GATGCTGGAT
GGCCCGACCG TGACCGCGCA CCGAACAGCA GCCGTGTCGT TGCTGGCGGC GCGCTTGCTG
GCGCCTGAGC CGGCGGGGGA TCTCCTGTTG ATCGGCGCCG GTGCCCAGGC CCGCGCACAT
CTGGAGGCCT TCCGCTTCGG ACTGGGCACG CGTCGCGTCA CCATCATTGC GCGCACGGCT
GCAAGCGCCG ATGGGCTGGC GGACTACGCA CGCGCGCTCG GCATGGACGC CACGGCGCTG
GCGGGCGGCG ACGCGGCGGG CGTGGCAGAT GCTGCTCGTG CCATGCTGCC GCAGACACCG
CTGGTCGTCA CGGCAACACC GTCATCGCAA CCGGTACTCC CTGATTTGGG CGATCCTGGC
CACCCCGCTG GCTATGCGTG GGGCGCGCAT CACTTCATCG CTGCTGTTGG CGCGTTTCGG
CCCGACATGG CCGAGCTGCC GCCGCGCCTT TGCGTGCATG CCGCAGCGGT CGATCGGCTA
TACGCCGATA CCTTGGTCGA CCTGGAAGCC GAAGCCGGCG ATCTGCTGCA GGCCGGCGTG
CCGTGGTCGC GTGTGCGGCC ATTACAACAG TGCATCGATA TGCCGCCCGA CACGCTTACG
CAGCCTGCGC CGATATCGCC CGTGGTGTTC AAGAGCGTGG GCAGTGCCCT GTGGGATCTG
GCCGCCTGCG TGCTGGCGCT ATCCAAATCC AGAACTGTTT AA
|
|---|
| Protein sequence | MLETLDAATT AARLPYAALA DAIAQVLRDA RAGRAQAPAR LVMPVAGGGS LLLMPACNAD
IAITKMITVH PHNPGQGLPA IHGEVVVMNA RTGERRLMLD GPTVTAHRTA AVSLLAARLL
APEPAGDLLL IGAGAQARAH LEAFRFGLGT RRVTIIARTA ASADGLADYA RALGMDATAL
AGGDAAGVAD AARAMLPQTP LVVTATPSSQ PVLPDLGDPG HPAGYAWGAH HFIAAVGAFR
PDMAELPPRL CVHAAAVDRL YADTLVDLEA EAGDLLQAGV PWSRVRPLQQ CIDMPPDTLT
QPAPISPVVF KSVGSALWDL AACVLALSKS RTV
|
|---|
| |