| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3220 |
|---|
| Symbol | |
|---|
| ID | 8020904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3402698 |
|---|
| End bp | 3403096 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644832015 |
|---|
| Product | ISPsy11, transposase OrfA |
|---|
| Protein accession | YP_002983158 |
|---|
| Protein GI | 241664798 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGGC AGAAGAAGCG AACGCAGAGG GACTACACGC TGGCTTTTAA GTTGGCAGTG
GTTGAGCAGG TGGAAAAAGG CGAGCTGACC TACAAAGGGG CGCAGCGACG CTATGGCATT
CAGGGTCGTT CGACGGTGCT GGTATGGTTG CGCAAGCACG GACGACAGGA CTGGAGCGCC
TCGGCGGAGG CCAAAACCAC GATGGAAAAT CAAAGCAGCC AGCGCAAGTC GCTCACGCCA
GAGCAGCGCA TCAAGGAATT GGAAGTGCAG TTGCGGGAGG CCCAAGAGAA GGCACGTCTG
TTCGAGGCGG TGATCGACGT GATCCAGAAA GAGCATGGGG TGCGCGTCGT AAAAAAGCCT
TTGGGCAGGT CCTCACGCAA AAGCTCGTCC AAGGGCTGA
|
|---|
| Protein sequence | MDGQKKRTQR DYTLAFKLAV VEQVEKGELT YKGAQRRYGI QGRSTVLVWL RKHGRQDWSA
SAEAKTTMEN QSSQRKSLTP EQRIKELEVQ LREAQEKARL FEAVIDVIQK EHGVRVVKKP
LGRSSRKSSS KG
|
|---|
| |