Gene Rpic12D_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3213 
Symbol 
ID8020897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3395121 
End bp3395891 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID644832009 
ProductABC transporter related 
Protein accessionYP_002983152 
Protein GI241664792 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG ACATCATTCT CGAAACGCGC GGACTGACCA AGGGCTTCAA GGGCTTTACC 
GCCGTGTCCG ACGTCAACCT GCGCGTGCAG CGTGGGTCCA TCCATGCGCT CATCGGCCCG
AACGGTGCCG GCAAGACGAC CTGTTTCAAC CTGCTGACCA AATTCCTGGT GCCCACGCGC
GGCACGATCC TGTTCAACGG CGTCGATATC ACGTCGGAGA AGCCGGCACA GATCGCGCGC
CGCGGCGTCA TCCGCTCGTT CCAGATCTCC GCCGTGTTTC CGCATCTGAC GGTGATGGAA
AACGTTCGCG TTGGACTGCA GCGGCAGCTC GGCACGGCGT ACGCGTTCTG GCGCAGCGAG
CAGTCGCTCA ACACGCTGAA TGCGCGCGCG ATGGAGCTGC TCGAACAGGT GGGGCTGACG
GAGTTTGCGC ACACCGTGAC GGTGGAGCTG CCCTACGGCC GCAAGCGCGC GCTGGAGATT
GCGACCACGC TGGCGATGGA GCCCGAGCTG ATGCTGCTCG ACGAGCCCAC GCAGGGCATG
GGCCACGAAG ACGTGGACCG CGTGACGGAG CTGATCAAGC GCGTCGCACA GGGCCGCACG
ATCCTGATGG TCGAACACAA CATGAACGTG GTCTCGTCCA TCGCCGACAA GATCACGGTG
CTGCAGCGCG GCCAGATCCT GGCCGAAGGC CTGTACGAAG ACGTCTCGAA GAACCCGCAG
GTGATGGAGG CCTATATGGG CACCGCCGAT GCGGCGCTGG AAGGCCATTG A
 
Protein sequence
MAQDIILETR GLTKGFKGFT AVSDVNLRVQ RGSIHALIGP NGAGKTTCFN LLTKFLVPTR 
GTILFNGVDI TSEKPAQIAR RGVIRSFQIS AVFPHLTVME NVRVGLQRQL GTAYAFWRSE
QSLNTLNARA MELLEQVGLT EFAHTVTVEL PYGRKRALEI ATTLAMEPEL MLLDEPTQGM
GHEDVDRVTE LIKRVAQGRT ILMVEHNMNV VSSIADKITV LQRGQILAEG LYEDVSKNPQ
VMEAYMGTAD AALEGH