Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3211 |
Symbol | |
ID | 8020895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3393002 |
End bp | 3394210 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644832007 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002983150 |
Protein GI | 241664790 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTCA AGAAGCTGGC TGGTGCATTG ATGGCGATAG GGCTGGGGGC GGCCGCATTC GGCGCGCATG CGCAGGTGAG CGGCGACAAG GTGAAGATCG GCTACATCAC GGATCTTTCG GGGCTGTATG CCGACATCGA CGGGCAGGGC GGTGTCGAGG CGGTGAAGAT GGCGATCGAG GATGCGGGCG GCAAGGTGCT CGGCAAGCCG ATCGAACTCG TGACGGCGGA CCACCAGAAC AAGGCCGACA TTGCCGCATC GAAGGCGCGT GAATGGATGG ACCAGCAAGG CCTGGACATG CTGCTGGGCG GCACGAACTC TGCCACGGGC CTGGCCATGA ACAAGGTGGC TTCCGAGAAG AAGCGCGTGT TCATCGACAT CGGTGCCGGC ACGGCGCGCC TGACCAACGA AGAGTGCACG CCGTACACGA TCCACTATGC GTACGACACC GTGGCACTGG CCAAGGGCAC GGGCAGCGCG GTGGTCAAGC AGGGCGGCAA GTCGTGGTTC TTCCTGACCG CCGATTACGC GTTCGGTCAC TCGCTGGAGA ACGACACCAC GGCTGTGGTG AAGGCCAACG GCGGCACGGT GGTCGGTTCG GTCAAGCACC CGCTGTCGGC ATCGGACTTC TCGTCGTACC TGCTGCAGGC GCAGTCGTCC AAGGCACAGA TCCTGGGCCT GGCCAACGCT GGCGGCGACA CGATCAACTC GATCAAGGCA GCCAAGGAAT TCGGCATCAC CAAGACGATG AAGATCGCAG GCCTGCTGAT GTTCATCAAC GACGTGCACA GCCTGGGTCT GCAGACGGCC GAAGGCCTGC TGATGACCGA CAGCTGGTAC TGGGACATGA ACGACGCGTC GCGCAAGTTC GCCAACCGCT ACTTCATGAA GATGAAGAAG ATGCCGAGCA GCCTGCAGGC AGCGGATTAC TCGGCGGTGT CGAACTACAT CAAGGCCGTG GCCGCTGCTG GCACGGATGA TCCGGACAAG GTCATCGCCC AGCTCAAGAA GACCAAGATC GACGACTTCT ACACGAAGGG CTATATCCGC CAGGACGGCC GTGCCATCCA CGACATGTAC CTGCTGCAGG TAAAGACGCC GGCCGAATCG AAGAAGCCGT GGGATTACCT GAAGGTTGTC GCGACGATCC CGGGCGAGCA GGCTTTCACC ACGCCCGCCG AGTCGAAGTG CTCGCTGATG AAGAAGTAA
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Protein sequence | MTLKKLAGAL MAIGLGAAAF GAHAQVSGDK VKIGYITDLS GLYADIDGQG GVEAVKMAIE DAGGKVLGKP IELVTADHQN KADIAASKAR EWMDQQGLDM LLGGTNSATG LAMNKVASEK KRVFIDIGAG TARLTNEECT PYTIHYAYDT VALAKGTGSA VVKQGGKSWF FLTADYAFGH SLENDTTAVV KANGGTVVGS VKHPLSASDF SSYLLQAQSS KAQILGLANA GGDTINSIKA AKEFGITKTM KIAGLLMFIN DVHSLGLQTA EGLLMTDSWY WDMNDASRKF ANRYFMKMKK MPSSLQAADY SAVSNYIKAV AAAGTDDPDK VIAQLKKTKI DDFYTKGYIR QDGRAIHDMY LLQVKTPAES KKPWDYLKVV ATIPGEQAFT TPAESKCSLM KK
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