Gene Rpic12D_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3206 
Symbol 
ID8020890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3389226 
End bp3389984 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID644832002 
Productprotein of unknown function DUF81 
Protein accessionYP_002983145 
Protein GI241664785 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG CTTTGCTCGC CGTGGCCGGT TTTCTGGCCG GCCTGATCGA TGCTGTTGCT 
GGTGGCGGCG GCCTGGTGCA GATTCCCGCG CTCTTCTCGG CGTATCCCAA CATCGTCCCC
GCCACGCTGA TCGGCACAAA CAAGGTCGCG TCGATGTCGG GCACCGCGAC GGCGGCGGTG
CGCTACGGCC GCACGGTGCG CATTTATTGG GGCGCCACAG CGCCGGCTGT GGTCACGGCG
TTTATGTTTT CGCTGCTGGG CGCATGGGCG CTCACGCACA TTCCGGCCGA ACCGCTGCGC
CGTGCGCTGC CGTTCGTGCT GGCGGTGCTG CTCGTCTACA CGGTGGCCAA GAAGAACCTG
GGCGCCGACC ATGCTCCGAG CCTCAAGGGC TGGCGCGAGC GCGCCGCGGC ATTGCTGGCC
GGCGCGGCCA TTGGCTTCTA CGACGGCGTG TTTGGCCCGG GCACGGGCAG CTTTCTGATG
ATCGTGTTCG TGCGCGTGTT CGGATACGAC TTCCTGCACG CGTCGGCGTC CACCAAGATC
GTGAATCTGG CGACCAACGT GGCAGCGCTG TTGCTGCTGG CCGCCAAGGG GCACGTGTGG
TGGCAGCTCG GCCTGGTGAT GGCGGTGGCC AACGTGGCCG GCAATCAGGT CGGCAGCCAC
CTCGCGCTGC GGCACGGCAG CCGCTTCGTG CGCAAGGTGT TCATCGTGGT GGTGTTGGCG
CTGATTTTGA AGACGGCTTA CGACGCGTTC ATCCGTTGA
 
Protein sequence
MEFALLAVAG FLAGLIDAVA GGGGLVQIPA LFSAYPNIVP ATLIGTNKVA SMSGTATAAV 
RYGRTVRIYW GATAPAVVTA FMFSLLGAWA LTHIPAEPLR RALPFVLAVL LVYTVAKKNL
GADHAPSLKG WRERAAALLA GAAIGFYDGV FGPGTGSFLM IVFVRVFGYD FLHASASTKI
VNLATNVAAL LLLAAKGHVW WQLGLVMAVA NVAGNQVGSH LALRHGSRFV RKVFIVVVLA
LILKTAYDAF IR