Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3202 |
Symbol | |
ID | 8020886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3386194 |
End bp | 3387090 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644831998 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002983141 |
Protein GI | 241664781 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGAT CGGAACCGGG CTGGGAGTTG TATCGGACGT TTCTTGCCGT CGTGCGAGAA GGATCGCTGT CGGGCGCCGC CCGCGCGCTG GGGCTGACGC AGCCGACGGT GGGGCGGCAT GTCGATGCGC TCGAACGGGC GCTGGGCATG TCGCTCTTCC TCCGAACACA GCAGGGGCTG AGCCCCACAG AAGCGGCGCT ATCGCTGCGG CCGTTTGCGG AATCGCTGGA GGCCACGAGC GCCGCCTTGC TGCGCGCCGC CTCCAGCCAG GGCGAGGGCG TGCGCGGCAC CGTGCGCATC ACCGCCAGCG AGGTGGTGGC GGTGGAAGTG CTGCCACCCA TCCTCGCCGA CCTGCACGCC GCCTATCCGG AGCTGACGCT CGAACTGGTG CCCTCCAACC GGATGGAAGA CCTGCTGCGC CGCGAAGCGG ATATCGCCGT GCGCATGCAG CCACCGAGCC AGGGCGTGCT CGTCGCGCGG CATCTCGGCG GCATCGAGCT TGGGTTGTTC GCGCATCAGC GCTACCTGGC GCAGCGCGGC ATGCCCACCA CGATAGAAGA ACTGGCTGGC CACACCTTGA TCGGTTACGA CAAAGAGAAC GCGTTCTTGC GCAGCATGCG GGCGCAGTTT CCGTGGGTCC AACGCAACCG CTTCGCGCTG CGCACAGACA GTGACCTGGC CGCGATTGCC GCGCTGCGTG CGGGCTTTGG CATCGGCTTC TGCCAAGTCG GCCTGGCGCG GCACAACGCG GATTTGGTTC GGCTGTTCAG TGAGCAGATC GCCATCACGC TCGACACCTG GCTCGCCATG CACGAAGACC TGCGTGACAG CCCGCGTTGC CGCGTCGTGT TTGATGCGCT GGCGACGGGG CTGCTGCGAT ACATCAACGG CGACTGA
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Protein sequence | MDRSEPGWEL YRTFLAVVRE GSLSGAARAL GLTQPTVGRH VDALERALGM SLFLRTQQGL SPTEAALSLR PFAESLEATS AALLRAASSQ GEGVRGTVRI TASEVVAVEV LPPILADLHA AYPELTLELV PSNRMEDLLR READIAVRMQ PPSQGVLVAR HLGGIELGLF AHQRYLAQRG MPTTIEELAG HTLIGYDKEN AFLRSMRAQF PWVQRNRFAL RTDSDLAAIA ALRAGFGIGF CQVGLARHNA DLVRLFSEQI AITLDTWLAM HEDLRDSPRC RVVFDALATG LLRYINGD
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