Gene Rpic12D_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3195 
Symbol 
ID8020879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3378912 
End bp3379823 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID644831991 
ProductparB-like partition protein 
Protein accessionYP_002983134 
Protein GI241664774 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TGAAGAAAAA GGGACTGGGC CGCGGCCTCG AAGCACTGCT CGGCAGCCCC 
GCCGAGATTG TCGAAGCCGC CAGGCAAGAG GGCGCGCCGA CGGTGCTGAA GCTGGAGCAG
ATGCAGCCCG GCAAATATCA GCCGCGCACG CGCATGGACG AGGGCGCGCT GCAGGAGCTC
GCCGCGAGTA TCCGGGCGCA GGGCCTGATG CAGCCGATTC TGGTGCGCAA GGTCGAGTCC
GACGGTGCCA AGCCCAAGTA CGAAATCATC GCGGGTGAAC GCCGCTTCCG CGCTTCACGC
CTCGCCGGCC TGACCGAGGT GCCCGTCCTC GTGAAGGACG TGCCGGATGA ATCGGCCGCC
GCCATGGCGC TGATCGAAAA CATCCAGCGC GAGGATCTCA ACCCGTTGGA AGAAGCGCAG
GGCATTGCGC GCCTGGTGCG TGAATTCCAG TTCACGCATG AGCAGGCGGC GGAATCGGTC
GGGCGTTCGC GCAGCGCGGT GTCGAACCTG CTGCGCCTGC TCAATCTCGC TCAGCCTGTG
CAGACCATGC TGATGGCCGG CGACCTCGAC ATGGGCCACG CCCGCGCGCT GCTCGCCGTC
GATGGTGCCA CACAGATCAC ATTGGCTAAC CAGATCGTCA ACAAGCGCCT GTCGGTGCGC
GAGACGGAAA AACTGGTGGC GTCGACACTC AAGCCGTTCG AGCTGAAATC GCTGAAGCAG
AAGGGCGGGC ACCAAGGCGG CCGCGACGTG GCCCGCCTCG AAGAAGAGCT GGCCGACCAG
CTCGGCCTAG GTGTGCAGAT CAAGCTGGCG GCCAAGGGGG GCGGTCAGCT GACCGTGCAA
TTCAGCAGTC TCGACGAGTT CGATGGGCTG CTGGCGCGCC TGCGTCTCGA CGCCGGCGAA
GAGGCTGCCT GA
 
Protein sequence
MSTMKKKGLG RGLEALLGSP AEIVEAARQE GAPTVLKLEQ MQPGKYQPRT RMDEGALQEL 
AASIRAQGLM QPILVRKVES DGAKPKYEII AGERRFRASR LAGLTEVPVL VKDVPDESAA
AMALIENIQR EDLNPLEEAQ GIARLVREFQ FTHEQAAESV GRSRSAVSNL LRLLNLAQPV
QTMLMAGDLD MGHARALLAV DGATQITLAN QIVNKRLSVR ETEKLVASTL KPFELKSLKQ
KGGHQGGRDV ARLEEELADQ LGLGVQIKLA AKGGGQLTVQ FSSLDEFDGL LARLRLDAGE
EAA