| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3194 |
|---|
| Symbol | |
|---|
| ID | 8020878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 3378014 |
|---|
| End bp | 3378562 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644831990 |
|---|
| Product | ATP synthase I chain |
|---|
| Protein accession | YP_002983133 |
|---|
| Protein GI | 241664773 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3312] F0F1-type ATP synthase, subunit I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.559381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCAA CCGACCGGCA ACGGCCCGAT TCTTACGCTT CGTTGAAAGC CGCCCGACCC
ACGTCGGCGC AGGATCCGAA GCGCGAAGGT TGGGACGATG AGGAGCAGGC GGAGCCGCCG
GTGCATGTGC TCTCGCATGA CGAAGCGGTC GCCCTGTTCG GCGAGGAGGC TGTGCAAGCC
TCGCGTATCA CGCCCTTTTC CATCGTGCTC GGCCAAGTGG CCATCACACT GTTGTGTGGG
CTCGGTTGGT ATGTCGGCAG TTGGTTCGCG GGAGCGGGCG CTGCGTCAGC CGCCGAGGCT
GGATTGTCGG CGCTGCTGGG CGGTGGCGTA TGCGTGGTGC CTTCGGCATG GTTCGCGATG
CGGCTGTCGA CGGCCAAGGG GTTCGAATCC ATCGCCCGCC TCGTAGTTGG CGAAGCGATC
AAGGTGCTTG GCACGGTCGC GCTGCTGGTG ATCGTGGTGG TGGTGTTCAA GGGCCTGCAT
TGGCCGCCCT TGCTGATCAC CCTGATCCTG GCGCTCAAGA TGTATTGGGT CGGTCTCGCG
CTGCGATAG
|
|---|
| Protein sequence | MQPTDRQRPD SYASLKAARP TSAQDPKREG WDDEEQAEPP VHVLSHDEAV ALFGEEAVQA
SRITPFSIVL GQVAITLLCG LGWYVGSWFA GAGAASAAEA GLSALLGGGV CVVPSAWFAM
RLSTAKGFES IARLVVGEAI KVLGTVALLV IVVVVFKGLH WPPLLITLIL ALKMYWVGLA
LR
|
|---|
| |