Gene Rpic12D_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3190 
Symbol 
ID8020874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3375436 
End bp3375972 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content63% 
IMG OID644831986 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_002983129 
Protein GI241664769 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC TCGCAACCGT TGCCCGTCCG TACGCAGAGG CGCTGTTCCG CGTGGCGAAG 
GCCGGCAATC TGGGTGCATG GTCTGAGCTC GTGTCGGAAA TGGGGCAAAT TGCTGCCGTG
CCCGACATGA AGGCAGTCGC CGATGATCCG AAGCTCTCCA AAGCCGATGT GGCGGGGATC
TTCCTGTCGG CGCTGAAATC TCCGGTTTCG CATGAGGCGA AGGAACTGGT TGGCCTGCTG
GTGGCCAACA AGCGTCTGTC GCTGCTGCCG GAAATTGCCG CGCAATTCCA TGTGCTGCGG
AATGCCAGTG AAGGCGCCGC CGACGTCGAG ATCACCAGTG CGTTCCCGCT TGAGGGCGCG
CCCCTGACCG AACTGGTCGC CACGCTCGAA CGCAAGTTCG GCAAGAAGCT GCAGGCTCAC
GTGAGCGTCG ATCCTTCGTT GATCGGCGGC GTGCGTGTGC AGATTGGCGA CGAAGTGCTC
GACACCTCGG TGCGCGCGCG CCTGACGCAG ATGCAGTCTG CGCTGACCGC CGCGTAA
 
Protein sequence
MAELATVARP YAEALFRVAK AGNLGAWSEL VSEMGQIAAV PDMKAVADDP KLSKADVAGI 
FLSALKSPVS HEAKELVGLL VANKRLSLLP EIAAQFHVLR NASEGAADVE ITSAFPLEGA
PLTELVATLE RKFGKKLQAH VSVDPSLIGG VRVQIGDEVL DTSVRARLTQ MQSALTAA