| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3174 |
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| Symbol | hemE |
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| ID | 8020858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3356653 |
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| End bp | 3357756 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831970 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002983113 |
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| Protein GI | 241664753 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.336159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CGCTCGCCAA CGACACCTTC CTGCGCGCCC TGCGCCGCCA GCCCACCGAC
TACACGCCGC TGTGGCTGAT GCGCCAGGCG GGCCGCTATC TGCCCGAGTA CAACGCCACG
CGCGCGCGGG CCGGCAGCTT TCTCGGCCTG GCCAAGTCGC CGGCGTATGC GACCGAGGTG
ACGTTGCAGC CGCTGGATCG CTACCCGTTG GACGCGGCAA TCCTGTTTTC CGACATCCTG
ACCGTGCCCG ACGCCATGGG CCTGGGGCTG TCGTTTGCAC AGGGCGAGGG CCCGCGCTTT
GCCAAGCCGG TGCGCACGGA AGCCGATGTG GCGGCGCTGT CGGTGCCGGA CATGTCGTCT
CTGCAGTACG TGTTTGACGC CGTGGCGGAA ATCCGCCGTG CGCTCGTGCA GGACGGCCGC
CAGCGTGTGC CGCTCATCGG CTTCTCGGGC AGCCCGTGGA CGCTCGCCTG CTACATGGTC
GAAGGCGGCG GCTCGGACGA CTTCCGCACC GTCAAGTCGA TGCTCTACGC GCGCCCGGAC
CTGATGCACC GCATCCTGGA GATCAATGCC CAAGCCGTGA TCGACTATCT GAATGCGCAG
ATTGAGGCCG GTGCCCAGGC TGTGCAGGTG TTTGATACCT GGGGCGGTGC CTTGGCCGAT
GGCATCTATC AGCAGTTCTC GCTGGCTTAC ATGGCGCGCG TGGTGAATGG TATTCGCGCC
GGGGCAGACG GCCAGCGCGT GCCGGTCATC CTCTTCACCA AGGGCGGTGG CCTGTGGCTC
GAAGCCATGG CCGCGACGGG TGCCGACGCG CTGGGTGTGG ACTGGACCGT CAACCTGCAG
CTCGCGCGCC AGCGAACGGC AGGGCGCGTT GCCCTGCAGG GCAACCTGGA CCCGACAGTG
CTGTTTGCTG AACCCGACGC GATTCGTGCC CAAGTGCGTC GCGTGCTGGA AGACTACGCA
GCCGGCGGCG GCAGCGACGG CCACATCTTC AACCTCGGCC ACGGCATCTC GCAGTTCACA
CCGCCCGAAG CGGTGTCGGT GCTGGTGGAC GAGGTGCACA GCTTCAGCCG CGCGCTGCGC
ACGAAAGCGA AGTCACACGG TTGA
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| Protein sequence | MSAPLANDTF LRALRRQPTD YTPLWLMRQA GRYLPEYNAT RARAGSFLGL AKSPAYATEV
TLQPLDRYPL DAAILFSDIL TVPDAMGLGL SFAQGEGPRF AKPVRTEADV AALSVPDMSS
LQYVFDAVAE IRRALVQDGR QRVPLIGFSG SPWTLACYMV EGGGSDDFRT VKSMLYARPD
LMHRILEINA QAVIDYLNAQ IEAGAQAVQV FDTWGGALAD GIYQQFSLAY MARVVNGIRA
GADGQRVPVI LFTKGGGLWL EAMAATGADA LGVDWTVNLQ LARQRTAGRV ALQGNLDPTV
LFAEPDAIRA QVRRVLEDYA AGGGSDGHIF NLGHGISQFT PPEAVSVLVD EVHSFSRALR
TKAKSHG
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