| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3173 |
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| Symbol | |
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| ID | 8020857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3353774 |
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| End bp | 3356071 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644831969 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_002983112 |
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| Protein GI | 241664752 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CCCAAGTCGA CGCCGCGTTT TCTGATGCCA AGGTGTCGGC CTCCATTGTT
CGCGTGGTGA TTGATACGCC GCTCGATGCG GTGTTCGATT ACCGGTGTGG GCAGCCTGTG
CAGCCTGGGC AATTGGTTGT GGTGCCGTTT GGCAACCGGC GAGTGGCGGG GTTAGTCGTC
GAAACCGCCG CGACCACCGA TGTGCCGCAA GAAAAGCTGC GCGATGTCGA GCGGGTGCTC
GACTGGGTGC CGCCGCTCGA CGCCGAATGG CGGGCCCTGG CCGAATTTGC TGCCGGCTAC
TATCACCGCG CGCTCGGTGA AGTGATGTTA CCGGCGCTCC CGCCGCTGTG GCGAACCCCG
GGCAGTTGGG AAAACCTCGC CCGGCAGGCC ACCGAAACCG TCTACGTGAT GTTTGAACCC
GCCCGGGCAG CGTTGCTGGA CAGCATTCCG AAACGTGCGT CCGGCGCCAT GCGATTGGCC
GAAGCGCTGA CCGGCGATGG CGAGTTATCC ACCAGCGCGG CCATCGAGCT GCACGGGCAA
GCCGTTGCCA AGCTGCGCGA TTGGGCCACC GTCGGCTGGC TGCGCGCAGA ACTGCGTCCG
AAGGCGCTGC TGCCGCAACC GCTCGAACTC CCGGCGCCTT CCGTCGCGCC CCCCTTGAAC
GATGAGCAGG CCGCCGCCGT GGCAGCCATT GCCCAAGCTG GCGCGGCTGG CTCCTTCAGC
CCGTTCCTGT TGTACGGCGT GACCGGCAGC GGCAAGACCG AGGTCTACCT GCACGCCATC
GCCGATGCGC TGGCGCGGGA CCCTGCGGCC CAGGTGCTGA TGCTGGTGCC CGAGATCAAC
CTGACGCCGC AGCTGGAAGC ACGCATCGCC GCACGTTTTC CGGGCGTGCC CATGGCGGCG
CTGCACAGCG GCCTGGCCGA ACAGCCGCGC GCGTTGAACT GGCTCGCCGC GCATCGCGGT
GAGGCGCGCA TCGTGCTCGG CACGCGGCTG GCGATGCTGG CGTCGTTGCC CAACCTCGCG
CTCATCCTCG TCGACGAAGA ACACGACACG TCGTACAAGC AGCAGGAAGG CCTGCGCTAT
TCCGCACGGG ATTTGGCGCT ATGGCGTGCC AAGCAGCGCA ACATCCCCGT GGTGCTGGGC
TCGGCCACGC CGTCCCTGGA AACGTGGTGG CGCGCGGAGC AGACGCCCAC CACGCGCCTG
ACGCTCTCGC GGCGCGCGCA GGCCGAAGCG GTGCTGCCGC GCGTGTCGCT CATCGACCTG
AATCTGGAGC GCCGCGCCGG GCGCCAGATT CGCGATGGCC TGTCCAAACC ACTCGTCGAC
GCGATTGCCG ATCGCCTGGC GCGCGGCGAA CAGAGCCTGC TGTTCCTCAA CCGCCGCGGC
TACGCGCCCG TGCTGTCCTG CGACGCGTGC GGCTGGCTGT CGGGCTGCCC GCGTTGCTCA
GCGTACCTGG TGCTGCACAA GCCCGAGCGG CGCCTGCGCT GCCACCACTG CGGGTACGAA
TCGCGCATCC CGCATCATTG CCCGGACTGC GGCAACGTCG ACATCGCCCC GCTCGGGCGT
GGCACCCAGC GCATCGAAGA GACGCTCGGC GAGCTGTTCC CGCAGGCCCG CGTCGCCCGC
ATCGACGCCG ATTCAACCCG CCGCAAGGGC AGCGCCGAAG CGCTGTTCGA CACCGTGCAC
GAAGGCAGCG TCGACATCCT GATCGGCACG CAGATGGTCG CCAAGGGGCA CGACTTCCAG
CGCGTGACGC TGGTCGGCGT GGTCGCGCCC GATTCCTCGC TGTTTTCGCA CGACTTCCGG
GCCGGAGAGC ATCTGTTTGC CTCGCTGATG CAGGTGGCCG GCCGCGCGGG CCGGGCGGGC
CTGGCGGGCG AGGTGCTGAT TCAGACGCGG TATCCGGATG CCCCGGCGCT GCAGGCGCTG
GTTCGACATG ACTACGATGG TTTCGCGCGC CAGTTGCTGC GGGAACGCAA GCAAGCCGGG
CTGCCGCCGT TTGCCTATCA AGCCCTGCTC ACCGCCGAGC ACAAGGAAGT CGCGAGGGCG
CTTGAATTCT TGAGCGCTGC GCGCTCGGCA GGTGAAGCCT TGGCTGCTGA ATTGGGCGCG
CCAGTGTTCT TGCATGACCC GGTGCCGATG ACGATGGTGC GGCTGGCCAA CCGCGAGCGC
GCGCAGTTGC TGGTGGAATC GGGTTCTCGG GCGGCTTTGC AGAAGCTTTT GACGGCTTGG
ACTGAGGGGT TTGCGGGGAT CGGCAAGACC GTGAAGGGGG TGCGGTGGCA GTTGGAGATC
GATCCTTTGA GGATTTGA
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| Protein sequence | MTTPQVDAAF SDAKVSASIV RVVIDTPLDA VFDYRCGQPV QPGQLVVVPF GNRRVAGLVV
ETAATTDVPQ EKLRDVERVL DWVPPLDAEW RALAEFAAGY YHRALGEVML PALPPLWRTP
GSWENLARQA TETVYVMFEP ARAALLDSIP KRASGAMRLA EALTGDGELS TSAAIELHGQ
AVAKLRDWAT VGWLRAELRP KALLPQPLEL PAPSVAPPLN DEQAAAVAAI AQAGAAGSFS
PFLLYGVTGS GKTEVYLHAI ADALARDPAA QVLMLVPEIN LTPQLEARIA ARFPGVPMAA
LHSGLAEQPR ALNWLAAHRG EARIVLGTRL AMLASLPNLA LILVDEEHDT SYKQQEGLRY
SARDLALWRA KQRNIPVVLG SATPSLETWW RAEQTPTTRL TLSRRAQAEA VLPRVSLIDL
NLERRAGRQI RDGLSKPLVD AIADRLARGE QSLLFLNRRG YAPVLSCDAC GWLSGCPRCS
AYLVLHKPER RLRCHHCGYE SRIPHHCPDC GNVDIAPLGR GTQRIEETLG ELFPQARVAR
IDADSTRRKG SAEALFDTVH EGSVDILIGT QMVAKGHDFQ RVTLVGVVAP DSSLFSHDFR
AGEHLFASLM QVAGRAGRAG LAGEVLIQTR YPDAPALQAL VRHDYDGFAR QLLRERKQAG
LPPFAYQALL TAEHKEVARA LEFLSAARSA GEALAAELGA PVFLHDPVPM TMVRLANRER
AQLLVESGSR AALQKLLTAW TEGFAGIGKT VKGVRWQLEI DPLRI
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