Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3171 |
Symbol | putA |
ID | 8020855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3347696 |
End bp | 3351676 |
Gene Length | 3981 bp |
Protein Length | 1326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644831967 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_002983110 |
Protein GI | 241664750 |
COG category | [C] Energy production and conversion |
COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAA CCACCCTCGG GGTCAAGCTG GACGATGCTT CGCGTGAACG CCTCAAGCGC GTTGCGCAGT CCATTGACCG CACGCCGCAT TGGCTGATCA AGCAGGCGAT CTTCACGTAT CTGGATCAAG TGGAGCGGGG GCAGCTGCCA ACTGACGCAA ACGGCACGGC GGCGGATGGC CTCCCGTCCG CCGCCGCAGC CGTCTCGGAC GTGCACGAGG GTGACGAGCC CGCGGTGCAA CCGTTCCTCG AATTTGCGCA AAGCGTGCAA CCGCAGTCGG TCCTGCGCGC TGCCATCACC GCCGCCTACC GTCGGCCGGA AACCGAAGCC ATTCCGATGC TGCTGGAGCA GGCCCGCCTG CCGGGCGCGC TCGCCTCGGA AGCCAAGCAA CTCGCACGAG ACCTCGCCGG CAAGCTCCGC ACGCAAAAGG TCGGCACCGG CCGCGAAGGT CTGGTGCAGG GTCTCATCCA GGAATTTTCG CTGTCGAGCC AAGAAGGCGT GGCGCTGATG TGCCTGGCCG AGGCGCTGCT GCGCATTCCC GACAAGGCCA CGCGCGACGC GCTCATCCGC GACAAGATCA GCAACGGCAA CTGGCATTCG CACCTGGGCC AGAGCCCGTC GCTGTTCGTG AACGCCGCCA CCTGGGGCCT GCTGCTGACG GGCAAGCTGG TCGCCACGCA TAACGAAGCC GGGCTGTCGA AGGCGCTCAC GCGCATCATC GGCAAGAGCG GCGAGCCGCT GATCCGCAAG GGTGTGGATA TGGCGATGCG CCTGATGGGC GAGCAGTTCG TCACCGGCGA AACCATCTCT GAAGCACTGG CCAACGCGCG CAAGTTCGAG GCCGAGGGCT TCCGCTATTC CTACGACATG CTCGGCGAGG CCGCGATGAC GGAGGAAGAC GCCCAGCGCT ACCTCGCGTC GTACGAGCAG GCGATCCGCG CGATCGGGCA GGCCTCGGGC GGGCGCGGCA TCTACGAAGG GCCGGGCATC TCGATCAAGC TGTCGGCGCT GCACCCGCGC TACAGCCGCG CGCAATACGA CCGCACCATC AACGAGCTGT ATCCGCGCGT GAAGGCGCTG GCGATGCTGG CCCGCGAATA CGACATCGGC ATCAATATCG ACGCTGAAGA GGCCGACCGC CTGGAGCTGT CGCTCGACCT GCTGGAGCGC CTGTGCTTTG CGCCCGAGCT GGCTGGCTGG AATGGCATCG GCTTCGTGGT GCAGGGCTAC CAGAAGCGCT GCCCGTTCGT GCTCGACTAC ATCATCGACC TGGCCCGTCG CAGCAAGCAT CGCCTGATGA TCCGCCTGGT GAAGGGCGCG TATTGGGACA GCGAGATCAA GCGCGCCCAG GTCGACGGCC TGGAGGGCTA CCCCGTCTAC ACGCGCAAGG TCTACACCGA CGTGTCGTAT CTGGCCTGCG CGCGCAAGCT GCTGGCCGCG CCGGAAGCGA TCTTCCCGCA GTTCGCCACG CACAATGCGC ACACGCTCGC GGCCATTTAC CACATGGCCG GCCAGAACTA CTATCCCGGC CAATATGAAT TCCAGTGCCT GCACGGCATG GGCGAGCCGC TGTACGAGCA GGTCGTCGGA AACAAGCCGG GCAAGCTGAA CCGCCCGTGC CGCATCTACG CGCCGGTCGG TACGCACGAA ACGCTGCTGG CCTACCTCGT GCGCCGTCTG CTGGAAAACG GCGCCAACAC CTCGTTCGTG AACCGCATCG CGGACGAGTC GATTCCTCTG GACGACCTCG TCGCCGACCC GGTGGCGGTG GTGGAAAAGA TGCACGCCGA TGAAGGGACG CTCGGCCTGC CGCATCCGAA GATTCCGCTG CCGCGCGCCC TTTACGGTGA CGTTCGCGCC AACTCGTCGG GCATCGACCT GGCGAACGAG CAGCGCCTGG CGTCGTTGTC GTCCGCCCTT CTTGCCGGCA CCAGCACCGT CTGGTCGGCC GAGCCGACCA TCGGCGATGC GCCTTACGTG GGGGGGCCAT CGCAACTTCG GCAGCCGGTG CGCAATCCGT CGGACCTGCG TGACGTGGTC GGCCACGTGA CCGAAGCCAC CGAAGCCGAT GTGGATGCCG CGTTGTCGGC CGCCACCGCT GCCGCCCCGA TCTGGCAAGC CACGCCGCCC GAGGCACGGG CCGCACTGCT CGATCGCGCA GCAGACCTCA TGGAAGGCGA GATGCAGCAC CTGATGGGGC TGATCATTCG CGAGGCGGGC AAGACGCTGT CCAATGCGAT TGCCGAAGTG CGCGAAGCCG TCGATTTCCT GCGCTATTAC GCAGCGCAGG TGCGCGGCGG GTTCTCGAAT GACACGCATC GCCCGCTGGG CCCGGTGGTC TGTATCAGCC CGTGGAACTT CCCGCTGGCA ATCTTCACCG GCCAGGTGAG CGCTGCGCTG GCTGCAGGCA ACCCGGTCCT CGCCAAGCCC GCTGAGCAGA CCCCGCTGAT CGCCGCCCAG GCTGTGCGCA TCCTGCGCGA AGCCGGCGTG CCGGCCGGTG CCGTGCAACT GCTGCCGGGC CGCGGCGAGA CCGTCGGCGC AGCGCTGGTG AAGGACGTGC GCACCAAGGG CGTGATGTTC ACCGGCTCCA CCGAAGTCGC GCGCATCCTG CAGCGCACGC TGGCCGGCCG CCTCGATGCC AACGGCGCGC CGATCCCGCT GATTGCCGAG ACCGGTGGCC AGAACGCGAT GATCGTCGAT TCGTCCGCGC TGGCCGAGCA GGTGGTGGCC GATGTGCTGT CGTCCGCGTT TGATTCGGCG GGCCAGCGTT GCTCGGCGCT GCGTGTGCTG TGCCTGCAGG ACGACGTTGC TGACCGCGTG CTCGCGATGC TCAAGGGCGG CATGGCCGAA CTGGCGATGG GCAATCCGGA TCGCCTGTCG GTGGATGTCG GCCCCGTGAT CGACGCTGAA GCGCGCGACA ACATCGTCGG CCACATCGAA GCGATGCGTG CCAAGGGCCG CCGCGTGCAC CAGGCACCGG TGCCGGCTGC GTGCGCGCAC GGTACCTTCG TGCCGCCGAC GGTGATCGAA CTCGACAGCC TGTCGGACCT GACGCGTGAG ATCTTCGGTC CCGTGCTGCA CGTGGTGCGC TGGAAGCGTT CGGCGGACAA CACCGGTTTG ACGAAGCTGA TCGAGCAGAT CAACGGTACG GGCTACGGGC TGACGCTGGG CATCCACACG CGTATCGACG AGACCATCGC GCACGTGGTG GACCGCGCGC ACGTGGGCAA CCTGTATGTG AACCGCAATA TCGTCGGCGC CGTGGTGGGC GTGCAGCCGT TCGGTGGCGA GGGCCTGTCG GGTACGGGCC CGAAGGCCGG CGGCCCGCTG TATCTGCTGC GCCTGCTGTC GACGTGCCCG CAGGACGCCA TGCGCACCGC GCTGCAACTG ACCGCAGGCG CGGGTACGGA GGTCGATACC GATGCGCGCC GCGCGCTGCT GGCGCCGTTC GATGCGCTGA CGGAATGGGC TCGCAAGCAA TCGCCGGAAC TGGCCTCGCT GTGCGAGCGC CTGGCTGCAG CCTCGGCCAC GGGCGCCACC GCCACGCTGC CCGGCCCGAC CGGCGAGCGC AACACCTACA CGCTGTTGCC GCGCGAAGCC GTGCTGTGCG TGGCGGCCGA TCCGGCGGAT TGGCTGCGCC AGCTCGCCGC CATCCTGGCT GTCGGCAGCC TGGCCGTTGT GCAGGAAAAC CCTGCCATCG AAGCAGTACT TCGGGGCTTG CCGGCGGCAG TACAATCGCG CGTCCGCGTG GTCGGCTCGA CCGACGAAGC GGCGTTTGAT GCGGTGCTGC ATCACGGCGA TTCGGACCAT CTGCGCGCCA TCTGCGAAGG ACTGGCACGG CGTGCCGGCC CGATCGTGGG GGTGCAAGGC CTGCCGCATG GCGGGGAAGG GCTGGCGCTG GAGCGCCTGC TGATCGAGCG TTCGCTGTCG GTCAATACGG CCGCCGCGGG TGGCAACGCC AGCCTGATGA CCATCGGCTG A
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Protein sequence | MATTTLGVKL DDASRERLKR VAQSIDRTPH WLIKQAIFTY LDQVERGQLP TDANGTAADG LPSAAAAVSD VHEGDEPAVQ PFLEFAQSVQ PQSVLRAAIT AAYRRPETEA IPMLLEQARL PGALASEAKQ LARDLAGKLR TQKVGTGREG LVQGLIQEFS LSSQEGVALM CLAEALLRIP DKATRDALIR DKISNGNWHS HLGQSPSLFV NAATWGLLLT GKLVATHNEA GLSKALTRII GKSGEPLIRK GVDMAMRLMG EQFVTGETIS EALANARKFE AEGFRYSYDM LGEAAMTEED AQRYLASYEQ AIRAIGQASG GRGIYEGPGI SIKLSALHPR YSRAQYDRTI NELYPRVKAL AMLAREYDIG INIDAEEADR LELSLDLLER LCFAPELAGW NGIGFVVQGY QKRCPFVLDY IIDLARRSKH RLMIRLVKGA YWDSEIKRAQ VDGLEGYPVY TRKVYTDVSY LACARKLLAA PEAIFPQFAT HNAHTLAAIY HMAGQNYYPG QYEFQCLHGM GEPLYEQVVG NKPGKLNRPC RIYAPVGTHE TLLAYLVRRL LENGANTSFV NRIADESIPL DDLVADPVAV VEKMHADEGT LGLPHPKIPL PRALYGDVRA NSSGIDLANE QRLASLSSAL LAGTSTVWSA EPTIGDAPYV GGPSQLRQPV RNPSDLRDVV GHVTEATEAD VDAALSAATA AAPIWQATPP EARAALLDRA ADLMEGEMQH LMGLIIREAG KTLSNAIAEV REAVDFLRYY AAQVRGGFSN DTHRPLGPVV CISPWNFPLA IFTGQVSAAL AAGNPVLAKP AEQTPLIAAQ AVRILREAGV PAGAVQLLPG RGETVGAALV KDVRTKGVMF TGSTEVARIL QRTLAGRLDA NGAPIPLIAE TGGQNAMIVD SSALAEQVVA DVLSSAFDSA GQRCSALRVL CLQDDVADRV LAMLKGGMAE LAMGNPDRLS VDVGPVIDAE ARDNIVGHIE AMRAKGRRVH QAPVPAACAH GTFVPPTVIE LDSLSDLTRE IFGPVLHVVR WKRSADNTGL TKLIEQINGT GYGLTLGIHT RIDETIAHVV DRAHVGNLYV NRNIVGAVVG VQPFGGEGLS GTGPKAGGPL YLLRLLSTCP QDAMRTALQL TAGAGTEVDT DARRALLAPF DALTEWARKQ SPELASLCER LAAASATGAT ATLPGPTGER NTYTLLPREA VLCVAADPAD WLRQLAAILA VGSLAVVQEN PAIEAVLRGL PAAVQSRVRV VGSTDEAAFD AVLHHGDSDH LRAICEGLAR RAGPIVGVQG LPHGGEGLAL ERLLIERSLS VNTAAAGGNA SLMTIG
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