| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3164 |
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| Symbol | |
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| ID | 8020848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3338103 |
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| End bp | 3339479 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644831960 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_002983103 |
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| Protein GI | 241664743 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTT CTGTTTTCGA CCTCTTCAAG ATCGGCATCG GCCCGTCCAG CTCGCACACC
GTCGGGCCGA TGCGCGCCGC GCTGATGTTC GCCTCGGGCC TCGAAGCCGA TGGGCTGATG
CCGCAAGTCG CCAGCGTGCG CGTGGAGCTG TACGGCTCGC TCGGCGCCAC CGGCAAGGGC
CACGGCACCG ATCGCGGCGT CATCCTCGGC CTGATGGGCG AGGCGCCGGA CACGATCGAC
CCAGACACCA TCGACGCCAA GCTCGCGGCG CTGCGCGCCT CACAGTCGCT GTCGCTGCTG
GGCCGTCACG CGGTGCGCTT TACCGAGAAG GAGCACATCG CCTTCTACCG CCGCGAGGCG
ATGGCCGAGC ATCCGAACGG CATGAAGTTC CACGCCTTCG ATGCAGCAAG CGAGCGCCTG
CGCGAAGCGC GCTATCTGTC GGTCGGCGGC GGCTTTGTCG TCACCGCTGG CGCACCGAAC
ACGCAGGTGC TGGCCGCACA TGACCAATTG CCGCATCCGT TCCGCAGCGG CAAAGAACTG
CTGGCGATGT GCGAATCGAC GGGCAAATCC ATCGCCCGGC TGATGCTCGA AAACGAACTG
ACATGGCGCA GCGAAGCCGA AGTGCGAGCC GGCCTGCTCA ACATCTGGCA CGTGATGCAG
GCGTGCGTCG CGCGCGGCTG CCGCACGGAA GGTGAACTGC CGGGCCCCTT CCATGTGCGC
CGCCGCGCGG CCGAGTTGTA TTCGCGGCTC ACGGTGCAGG CAGAACGCAC GCTGTCCGAC
CCTCTGTCGG TGATCGACTG GGTGAACCTG TATGCGATTG CCGTGAACGA AGAGAACGCC
GCAGGCGGGC GCGTCGTCAC GGCGCCGACC AACGGCGCAG CCGGGATCAT CCCGGCCGTG
ATGCATTACT ACGACCGCTT CGTGCCCGGC GCGAAGGACA ACGGCGTGGT GGACTTCCTG
CTCACTGCTG GCGCGATCGG CATGCTTTAC AAGATGAATG CGTCGATCTC GGGCGCGGAA
GTGGGCTGCC AGGGCGAAGT CGGTGTGGCG TGTTCAATGG CGGCGGGCGC ACTCGCTGCG
GTGCTCGGCG GCTCGCCCGC GCAGGTGGAA AACGCTGCTG AGATTGGCAT GGAGCACAAC
CTGGGGCTGA CATGCGACCC GGTCGGCGGG CTGGTGCAGA TTCCGTGTAT TGAGCGCAAT
GCGATGGCGT CGGTGAAGGC GGTGAATGCG GCGCGCATGG CGTTGCGTGG GGACGGCACG
CATTATGTTT CGCTGGACTC CGTGATCAAG ACGATGCGCG AGACGGGGGC GGATATGAAG
ACGAAGTACA AGGAGACCGC CCGCGGGGGG TTGGCGGTGA ATATTGTGGA GTGTTGA
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| Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAALMF ASGLEADGLM PQVASVRVEL YGSLGATGKG
HGTDRGVILG LMGEAPDTID PDTIDAKLAA LRASQSLSLL GRHAVRFTEK EHIAFYRREA
MAEHPNGMKF HAFDAASERL REARYLSVGG GFVVTAGAPN TQVLAAHDQL PHPFRSGKEL
LAMCESTGKS IARLMLENEL TWRSEAEVRA GLLNIWHVMQ ACVARGCRTE GELPGPFHVR
RRAAELYSRL TVQAERTLSD PLSVIDWVNL YAIAVNEENA AGGRVVTAPT NGAAGIIPAV
MHYYDRFVPG AKDNGVVDFL LTAGAIGMLY KMNASISGAE VGCQGEVGVA CSMAAGALAA
VLGGSPAQVE NAAEIGMEHN LGLTCDPVGG LVQIPCIERN AMASVKAVNA ARMALRGDGT
HYVSLDSVIK TMRETGADMK TKYKETARGG LAVNIVEC
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