Gene Rpic12D_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3163 
Symbol 
ID8020847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3336888 
End bp3338006 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content67% 
IMG OID644831959 
Producthypothetical protein 
Protein accessionYP_002983102 
Protein GI241664742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGC TTCAACCTGC CCCGCTCTTC CGTCTGCTTG CGTGTGCTGC CGCTGTCGCG 
GTATGCGGCG CGTGCTCGCC GATACAGGCG GGGGCTGCGG CATCGGTATA CGCCGGCGCG
CACAACCCGA CCGGGCCGGC TCGCGATTGG TGCAGCGTTT CGCCTGCGGT GTCCGGCGAA
CCTGCTGCAG GAAAGCTGAT CGCCCGCGCT ACTCAGCATC TCGAGCAGAC ACCGCACCCA
CTGCCCCGCC TGCATACCGA AGGCACGCTG CCGCACCAGG GCATCTACGA CGAATCGGTA
GCGGCCGCGC GTGACTTTCC GGTCATGCGC GACGCAGCAA TGGCATGGCG CCTCACCGGC
GACACGCGGT TCGCCGAGCA GGTCGACATC TTTCTGCACG CCTGGGTCGG CACGTATGTA
CCGAGCTTCA ACCCGATCGA CGAGACAAAG TTCGATGCGC TGATCCAGGC GTACACGCTG
GCGCGCGACG GCTTGACGCC CGGCACACGC GCAGAGACGC AACGCTTCCT GCGCACGCTG
GCCGAGGGCT ATATCGCCCG CACCGAGTCG GCGCGCCAGC CGCTGTCCAA CACGTGGGTA
AATAATTGGC AGAGCCACCG CGTCAAGCTG ATGGCATTGT CGGCCGCCGC GCTGGGCGAT
CAGGCGCTGG TCGCGCAGGT GCATCGCCTG TTCCTGCAAC AGCTCGCCAA TAACGTGCGT
CCGGACGGGT CGGTAGAAGA CTTTGAGGAC CGCGACGCAC TCCACTACGT CGTCTACGAC
CTCGAGCCGC TGACGATGGC CGCGATTGCC GTGCAGCCTT TCGGCCAGCA GTGGCTACAT
GAACGCGCAG CCAACGGCGC CACGCTCGCC GCCGCCGTGG ATTGGCTCGT GCCGTATGCC
GACGGCAGCC GTACGCACGA GGAATACGTC CGCTCGCACG TTGCCTTCGA CAGGAAGCGA
GCCGATGCGG GCCTGCCCGG CTTCTCCGGC ATGTGGGAGC CGAAAAGCGC CGGAACACTG
TATTGGCAGG CTGCGCGACT GGACCCGAAA TACCGCACGC TGGCCGAACG GCTCGCCGCG
AGCGCGCCCG ACTGGCTGGC GCTGTGCGCA GCCCGTTGA
 
Protein sequence
MPMLQPAPLF RLLACAAAVA VCGACSPIQA GAAASVYAGA HNPTGPARDW CSVSPAVSGE 
PAAGKLIARA TQHLEQTPHP LPRLHTEGTL PHQGIYDESV AAARDFPVMR DAAMAWRLTG
DTRFAEQVDI FLHAWVGTYV PSFNPIDETK FDALIQAYTL ARDGLTPGTR AETQRFLRTL
AEGYIARTES ARQPLSNTWV NNWQSHRVKL MALSAAALGD QALVAQVHRL FLQQLANNVR
PDGSVEDFED RDALHYVVYD LEPLTMAAIA VQPFGQQWLH ERAANGATLA AAVDWLVPYA
DGSRTHEEYV RSHVAFDRKR ADAGLPGFSG MWEPKSAGTL YWQAARLDPK YRTLAERLAA
SAPDWLALCA AR