| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3158 |
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| Symbol | |
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| ID | 8020842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3328898 |
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| End bp | 3331018 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644831954 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002983097 |
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| Protein GI | 241664737 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.154088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.513844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCG GTCTCGTCCA CGGGCTCAAT GCTGCCCAAT CCGAAGGTGT GCATTACCTC
GACGGCCCAT GCCTGGTGCT GGCCGGGGCG GGCTCGGGCA AGACGCGCGT GATCACGCAA
AAGATCGCGC ACCTGATTCT CGACAAGGGC TTCGAGCCCA AGCACATCGC CGCGGTGACG
TTCACCAACA AGGCGGCCAA GGAAATGCAG GAGCGCGTGG CCAAGCTGAT GGACGGCGAG
ACGCGCGAAG ACGGCAAGCG CATTCCCATC AAGCAGTTGA CGGTCTGTAC GTTCCACTCG
CTGGGCGTGC AGATCCTGCG GGCGGAAGCC GAGCATGTCG GCCTCAAGCC ACGTTTCTCG
ATCATGGATT CGGACGATTG TTTCGGCATG ATCCAGGAGC AGCTGGCGAC CACCGACAAG
CAGTTGATCC GCCGCGTGCA GAGCACGATC TCGCTGTGGA AGAACGGTCT CGTCGATCCG
GACACGGCGA TTGCCGAGGC GCTCGCCAAC AACAACGTCG ATGACCACCA GGCGGCGCTC
GTCTATCGCA ACTACGTGGC GACGCTGCAC GCGTATCAGG CGGTGGACTT CGACGACCTG
ATCCGCATTC CCGCCGAGCT GTTCGCGCGC AATGAAGAGG TGCGCCTGAA GTGGCAGAAC
CGTCTGCGCT ACTTCCTCGT CGATGAATAC CAGGACACCA ACGCCTGCCA GTATCAGCTG
CTGAAGCTGC TGGCGGGCGG CTCGCACCTG CGTGCGCCGG CCTTTACGGC CGTGGGCGAC
GACGATCAGG CCATCTACGG CTGGCGTGGC GCCACGCTCG ACAACCTCAA GCTGCTGCAG
ACGGATTTCC CGAACCTGAA GGTGATCAAG CTGGAGCAGA ACTACCGCTC CACGGTGCGC
ATTCTGAATG CCGCCAACGC GGTCATCGCA CAGAACCCGA AACTGTTCGA GAAGACGCTG
TGGAGCGAGC ACGGCATGGG CGACGCGATC AACGTGACCA GCGCCAATGA CGAGGAGCAC
GAAGCGGAAA GCGTCGTCTT CAAGCTCTCT GCCCACAAGT TCGAGCGCCG CGCGCAGTTT
CGGGATTACG CGATCCTGTA TCGCGGCAAC TTCCAGGCGC GCCTGTTCGA GCAGATCCTG
CGCCGCGAGC GCATTCCGTA CGTGCTCTCG GGCGGGCAAA GCTTTTTCGA CAAGGCCGAG
ATCAAGGATC TGTGCGCGTA CCTGCGGCTG ATTGCCAACG CGGATGACGA CCCCGCCTTC
ATTCGCGCCA TCACCACGCC CAAGCGCGGT GTGGGCAATG CGACGCTCGA AGTGCTGGGT
TCGTTTGCCG GGCAGGCCAA GGTGTCGCTG TTCGAGGCGG CGATGATGGG CGGCATCGAA
GCGCAACTCG CGCCGCGCCA GCTCGAGCCG CTGCGCGTGT TCTGCGAATT CATCGTGCGG
CTCTCGGACC GCGCCGCCAA GGAGCCCGCC GCCACGCTGC TCGACGAGAT GATGGAAGGC
ATCCATTACG AGGCCTACCT GTACGACACC TACGACGAGC GCCAGGCCCA GAACAAGTGG
ACCAACGTGC TGGAGTTTCT GGACTGGCTC AAGCGCAAGG GCACCAAGCC CGAAAAGGAT
GACGACGAAG AGGCCGCCGG TTTCGACAAT GCCGATGGCT TGATGGACGC CGGTAAAAAC
CTGCTGGAAC TCACGCAGAC CATCGCGCTG ATCAGCATGC TCGAAGGCAA GGAAGAGGAC
CCGGATGCGG TGCGCCTGTC CACGCTGCAC GCGAGCAAGG GGCTGGAGTA TCCGCACGTG
TTCCTGGTCG GCGTGGAAGA GGGCATCTTG CCGCACTGCC GCGAAGACGA TGAGTTGACC
GACGAGAAGA TCGAAGAAGA ACGGCGGTTG ATGTATGTGG GGATCACGCG GGCGCAGCGC
AGCCTGCATA TCAGCTGGTG CAAGAAGCGC AAGCGGGCGC GGGAGACGGT GGTGTGCGAG
CCGTCACGCT ATATCGCTGA GATGAAGCTT GGAGAGGATG CCGGGCCGAC GCCGGAGGAC
ACCATGCCGG CGATGTCGCC GAAGGATCGG CTGGGGGCGT TGAAGGGGTT GTTGGCGGCT
AAGAAACCTG TGGCTTCGTG A
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| Protein sequence | MSSGLVHGLN AAQSEGVHYL DGPCLVLAGA GSGKTRVITQ KIAHLILDKG FEPKHIAAVT
FTNKAAKEMQ ERVAKLMDGE TREDGKRIPI KQLTVCTFHS LGVQILRAEA EHVGLKPRFS
IMDSDDCFGM IQEQLATTDK QLIRRVQSTI SLWKNGLVDP DTAIAEALAN NNVDDHQAAL
VYRNYVATLH AYQAVDFDDL IRIPAELFAR NEEVRLKWQN RLRYFLVDEY QDTNACQYQL
LKLLAGGSHL RAPAFTAVGD DDQAIYGWRG ATLDNLKLLQ TDFPNLKVIK LEQNYRSTVR
ILNAANAVIA QNPKLFEKTL WSEHGMGDAI NVTSANDEEH EAESVVFKLS AHKFERRAQF
RDYAILYRGN FQARLFEQIL RRERIPYVLS GGQSFFDKAE IKDLCAYLRL IANADDDPAF
IRAITTPKRG VGNATLEVLG SFAGQAKVSL FEAAMMGGIE AQLAPRQLEP LRVFCEFIVR
LSDRAAKEPA ATLLDEMMEG IHYEAYLYDT YDERQAQNKW TNVLEFLDWL KRKGTKPEKD
DDEEAAGFDN ADGLMDAGKN LLELTQTIAL ISMLEGKEED PDAVRLSTLH ASKGLEYPHV
FLVGVEEGIL PHCREDDELT DEKIEEERRL MYVGITRAQR SLHISWCKKR KRARETVVCE
PSRYIAEMKL GEDAGPTPED TMPAMSPKDR LGALKGLLAA KKPVAS
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