Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3156 |
Symbol | |
ID | 8020840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3325508 |
End bp | 3326992 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644831952 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_002983095 |
Protein GI | 241664735 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.574693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCGT TCGCGAAAAT GGCTGACACT CCGTCTGCCG AAAATGACAC CGCCTTCCGC TGGTCGGCGC CGCAGGTGCG CGCGCTCGCG CAGCGCTTTG ATACGTACGG CCCGCGCTAC ACCTCGTACC CAACGGCCGA CCGCTTCCAC AACGGGTTCG GCAACTCCGA CTATCTCGAC GCCTTGCACC GCCGCGCCGC GATCGCGCCC GCGCTGCATG CGCCGCTGTC GCTGTACATG CACCTGCCGT TCTGCGCGAA CCTTTGCTAC TACTGCGGCT GCAACAAGGT CATCACAAAG GACCGCTCGC GCAGCGCCCG CTACGTTGAA ACGCTCGCGC GCGAGATGGC GATGGTGGCC AGCCAGATTG GCCCACTGCG CCGCGTGACG CAGTTGCATT GGGGCGGCGG CACGCCGACT TTTCTTGCGC ACGACGAAAT GCGTGCCGTG ATGGCCGCCA CGCGCGAGCA TTTCGACGTG GCCAACGATG GCGAGATCTC CGTCGAACTC GACCCGCGCC ATGCCGACGA CGCCACGCTC GAAGTCTTGG CTGAAATCGG CTTCAACCGC GCAAGCCTGG GCATCCAAGA CTTCGACCCC GACGTCCAGC GCGCCGTCCA CCGCATCCAA AGTGTGGAAG AGACGCGCCG TGTGGTCGAT ACCGCGCGCC GGCTGGGCCT CGAGTCGATC AGCTTCGACC TGATCTACGG CTTGCCATAT CAGCGCACGG AAACCTTCAA CGCCACGCTG GATCGCGTGC TGGAGATGGC GCCCGATCGG CTGTCCGTCT ACAGCTATGC GCATCTGCCG CACCTGTTCA AGGCGCAGCG CCGCATCGAC ATGTTCACGC TGCCTACCGC CGACGAGAAG CTCGACTTAC TCGCCATGAC GGTCGAGCGG CTCGTCGCCG AAGGCTATGT CTACATCGGC ATGGATCACT TCGCGCGGCC TGACGATGCA CTTGCCATTG CGCAGCGTGA AGGGCGGCTG CAGCGCAATT TCCAGGGCTA TTCCACGCAC GCCGATTGCG ACATGCTGGC GTTTGGCGTG TCCGCCATCA GCCGCGTGGG CGATGTGTAT GCGCAGAACG AAAAGGATCT CGACGCTTAC TACGCTCGCA TCGACGCAGG CGAGCTGGCC GTGCTGCGCG GCATGTCGCT CACGCCGGAC GATCACGTGC GCCGCGCGCT GATCGGCGAG CTGATGTGCG GATTTGAATT GAACATGCGC GCATTCGGCG CGCGCCACGG GCTGGACTTC AAGCGCAGTT TTGCGGACGA GTTGCAGGCG CTGGCGCCGC TGGAAGAAGC CGGGCTGGTG AAGGTCGGGG ACGAGCGCAT CGTCATCACA CCGCAAGGGC GGCTGCTCGT GCGCCGCATC GCGATGGTGT TCGATGCGCA CCTGCGCGAG GCGGGCACGG AGCGCGCGAT GGAAGCCGAG GGCAAGCCCG TCACCTTCGT CCCGCGCTAC TCCAAGGTGG TCTGA
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Protein sequence | MFPFAKMADT PSAENDTAFR WSAPQVRALA QRFDTYGPRY TSYPTADRFH NGFGNSDYLD ALHRRAAIAP ALHAPLSLYM HLPFCANLCY YCGCNKVITK DRSRSARYVE TLAREMAMVA SQIGPLRRVT QLHWGGGTPT FLAHDEMRAV MAATREHFDV ANDGEISVEL DPRHADDATL EVLAEIGFNR ASLGIQDFDP DVQRAVHRIQ SVEETRRVVD TARRLGLESI SFDLIYGLPY QRTETFNATL DRVLEMAPDR LSVYSYAHLP HLFKAQRRID MFTLPTADEK LDLLAMTVER LVAEGYVYIG MDHFARPDDA LAIAQREGRL QRNFQGYSTH ADCDMLAFGV SAISRVGDVY AQNEKDLDAY YARIDAGELA VLRGMSLTPD DHVRRALIGE LMCGFELNMR AFGARHGLDF KRSFADELQA LAPLEEAGLV KVGDERIVIT PQGRLLVRRI AMVFDAHLRE AGTERAMEAE GKPVTFVPRY SKVV
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