Gene Rpic12D_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3155 
Symbol 
ID8020839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3324005 
End bp3325483 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content67% 
IMG OID644831951 
Productpyruvate kinase 
Protein accessionYP_002983094 
Protein GI241664734 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.561746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT TCCGCAATAC CAAAATCCTA GCCACCCTAG GCCCCGCCAG CAGCGACAAA 
GACACCATCC GCGCCCTCTT CGACGCCGGC GCAGACGTCT TCCGCCTGAA CTTCAGCCAC
GGCTCGCACG AAGACCACCG CAAGCGCTAC GACACCGTGC GCGCGGTGGA GGCCGAGACC
GGCCGCCCGA TCGGCATCCT CGCTGACATG CAAGGCCCGA AGCTGCGCAT TGGCACCTTT
GCCGACGGAC GCGTCGTGCT CAAGAACGGT GATCGCTTTG TGCTCGATCG CGATCCGACG
CCGGGTGATG TCACGCGTGT GCACTTGCCG CACCCCGAGC TGTACGCCGC GACCGCGCCG
GGCCAGTCGC TGTTGCTGGA CGACGGCAAG ATCCGCCTGG CAGTCGAAGC GGCTGATCCG
ACGGCCATCG TCACGCGCGT GGTCGATGGC GGCCCGCTGT CGGACCGCAA GGGCGTGAAT
GTGCCGGATG CCGTGATTCC CATTCCCGCG CTTACTGAGA AGGATCTGCG CGACTTGGAC
TTCGCCTTGT CGCTGGGCGT CGATTGGATC GCCCTGTCGT TCGTGCAGCG CGCCGAAGAC
GTGATCGCCG CGCGCGAGAT CATTGGCGAC CGCGCGGGCC TGCTCTCCAA GATCGAGAAG
CCCGCAGCGC TGCTGCATCT GGAAGACATC GTGCAGGCGT CCGACGCCCT GATGGTGGCG
CGTGGTGATC TGGGCGTGGA ACTGCCGCCC GAACGCGTGC CCGGCGTGCA GAAGCGCATC
CTGCGCATGG CGCGCCAGCA TGGCAAGCCG GTGGTGGTGG CCACGCAGAT GCTGGAATCG
ATGATCGAAG CGCCGGTGCC GACGCGTGCC GAAGCCTCCG ACGTGGCCAG CGCCGTGTAC
GACGGCACCG ATGCCGTGAT GCTGTCGGCC GAGTCGGCCA GCGGCAAGCA TCCGGTGGCG
GCGGTCAGCA TCATGAACCG CATCATCGCC GAGACCGAAC GCGACCCGCT CTACCGCAAC
CTGATCGACG CGCAGCACCA ACCGCCGCTG CCCACGCGCC AGGACGCAAT CTGCGCGGCC
CTGCGTGACG TGACGCACAT CCTGGGCGCA GTGGCTACCG TCACCTACAC GTCCAGCGGC
AAGACCAGCC TGCGCGCCGC ACGCGAGCGG CCACTGGCGC CCATCGTGAG CATCACGCCG
CGCCTGGATA CGGCGCGCCG TCTGGCGATC ACGTGGGGTG TACACAGCAC GGTCAGCCCC
GATGTGAGCA ATGTCGACGA GATGGTGGAT GCGGCGTGCC GAGCTGCCGC GCGTGAAGGC
TTTGCCGTGT CGGGCGACCA GATCGCCATC ACGGCGGGCA TGCCGTTCGG TCAGGCCGGG
TCAACCAACC TGCTGCGCCT GGCGGAAATC TGGCCGCAGA CGTTGGTCAG CGCCCAGACG
CAAACCACTG CACTGCAGCC CGAACCGGCA ACGGTCTGA
 
Protein sequence
MRRFRNTKIL ATLGPASSDK DTIRALFDAG ADVFRLNFSH GSHEDHRKRY DTVRAVEAET 
GRPIGILADM QGPKLRIGTF ADGRVVLKNG DRFVLDRDPT PGDVTRVHLP HPELYAATAP
GQSLLLDDGK IRLAVEAADP TAIVTRVVDG GPLSDRKGVN VPDAVIPIPA LTEKDLRDLD
FALSLGVDWI ALSFVQRAED VIAAREIIGD RAGLLSKIEK PAALLHLEDI VQASDALMVA
RGDLGVELPP ERVPGVQKRI LRMARQHGKP VVVATQMLES MIEAPVPTRA EASDVASAVY
DGTDAVMLSA ESASGKHPVA AVSIMNRIIA ETERDPLYRN LIDAQHQPPL PTRQDAICAA
LRDVTHILGA VATVTYTSSG KTSLRAARER PLAPIVSITP RLDTARRLAI TWGVHSTVSP
DVSNVDEMVD AACRAAAREG FAVSGDQIAI TAGMPFGQAG STNLLRLAEI WPQTLVSAQT
QTTALQPEPA TV