Gene Rpic12D_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3146 
Symbol 
ID8020830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3313368 
End bp3314708 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content63% 
IMG OID644831942 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_002983085 
Protein GI241664725 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCT TTACGCGCCC GTTGTTCGGG CAGGTTTTGA TTGCCCTGGC GGTGGGCATC 
GCGCTGGGCA TCTGGGCGCC CGAATTTGCG CAGAAGCTGC AGCCGCTCGG TGATGGTTTT
CTGAAGCTGA TCAAGATGCT GATCGCGCCG ATCGTCTTCT CTGTCGTGGT GGTGGGGATC
TGCGGCGCCG GCGAGCTGAA GAAGGTCGGG CGCGTGGGCG GCAAGGCGGT CATCTACTTT
GAAATCGTCA CGACGATTGC GTTGGCGCTG GGCATTGCAC TGGCCTATCT GTTCGGGCCC
GGCCACGGCA TGAATGTGGA TCCGAAATCG CTCGATCCGG CGGCCATGGC GTCGTACATG
ACGACCGCCA AGCAGGTGGA ATCGACTGGC GTTGCAGCGT TCTTCCTCAA GCTGATTCCC
GATACGTTCG TCAGCGGCTT CGTGAAGGGC GACATCCTGC AGGTGCTGCT GGTGTCGATC
CTGTTCGGCT GCTCCCTCTC GCTGCTGGGA GAGCGGACCA AGCCGCTGGT CAACCTGATC
GATCAGCTCT CCCATGTGCT GTTCCGCATG ATGGCCGTGA TCATCCGGCT GGCACCGCTG
GGCGTGCTGG GCGCGGTGGC CTTTACCGTC GGCAAGTACG GCGCGGGCTC GCTCAAGCAG
CTTGGCTTCC TGGTACTGCT GTTCTACGCA GCCGTGGCGC TGTTTGTGTT CGTGGTGCTC
GGCACCATCC TGCGCATGGC GGGTTTCAAC ATCTTCAAGC TGATCCGGTT CCTGCGCGCG
GAACTGCTGG TGGTGCTGGG CACGGCCTCG TCCGACGCGG TGCTGCCGTC CATCATGAAC
AAGCTGGAAA AGATGGGCAT CAAGCGCTCG GTGGTCGGCC TGGTCATCCC GACCGGCTAC
TCGTTCAACC TCGATGCGTT TTCGATCTAC CTGACGCTGG CCGCCGTGTT CATCGCGCAG
GCGACCAATA CGCCGCTGGC GCTGCAGGAC CTGCTGCTGA TCCTGGGCGT GGCGCTCGTC
ACCTCCAAGG GCGCGCACGG CATTCCGGGT TCGGCCATCG TGATTCTGGC GGCCACCCTG
TCGGTCATTC CGGCCATTCC GGCCATCGGC CTGGTGCTGG TGCTCTCCGT CGACTGGTTC
ATCGGCATTG CCCGTGCGCT GGGCAACCTG ATCGGCAACT GCGTCGCCAC GGTGGTCATC
GCCGCGTGGG AAAAAGACAT CGACCGCGTG CGTGCCAATG CGGTGCTCGA CGGCAAGATC
GACATCACCG AGGAAGGCGA AGCGATTCCG CACGGCTTTG GTGTGGCGGC GCCGGCTGCG
CACACACTGC CGCATGCCTG A
 
Protein sequence
MQRFTRPLFG QVLIALAVGI ALGIWAPEFA QKLQPLGDGF LKLIKMLIAP IVFSVVVVGI 
CGAGELKKVG RVGGKAVIYF EIVTTIALAL GIALAYLFGP GHGMNVDPKS LDPAAMASYM
TTAKQVESTG VAAFFLKLIP DTFVSGFVKG DILQVLLVSI LFGCSLSLLG ERTKPLVNLI
DQLSHVLFRM MAVIIRLAPL GVLGAVAFTV GKYGAGSLKQ LGFLVLLFYA AVALFVFVVL
GTILRMAGFN IFKLIRFLRA ELLVVLGTAS SDAVLPSIMN KLEKMGIKRS VVGLVIPTGY
SFNLDAFSIY LTLAAVFIAQ ATNTPLALQD LLLILGVALV TSKGAHGIPG SAIVILAATL
SVIPAIPAIG LVLVLSVDWF IGIARALGNL IGNCVATVVI AAWEKDIDRV RANAVLDGKI
DITEEGEAIP HGFGVAAPAA HTLPHA