| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3143 |
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| Symbol | |
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| ID | 8020827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3310123 |
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| End bp | 3311397 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644831939 |
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| Product | peptidase M20 |
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| Protein accession | YP_002983082 |
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| Protein GI | 241664722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.138788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG CCCAACTTGC TACCCCCGGC ATCGATGCGG ATATCCGCGC GTTTGTCGAG
GCCGCGCACG CGCAGCAGAT TGAATTCCTG CGCGAGCTGG TGAAGGTGCC GTCGGACAAC
CCGTCCGGCG ATTGCGCTCC GCATGCCGTG CGCGCCAAGG CGCTGCTGGA GGCGCTGGGC
CTGACGGTCG AGGCGCATGC CGTGCCGCAG GCGCAGGTAC GTGCCGCCGG CATGGTCAGC
GCCACCAACC TGATCGTGCG GCACACCTTC GGTAACGGCG GCCCCACGGT TGCCATGAAC
GCACACGGCG ATGTCGTCCC GCCCGGCCTT GGCTGGACGC ACGATCCGTA CGGCGGCGAG
ACCGTCGAGA CCGAACACGG CCCCACCATG TTCGGCCGCG GCGTGGCGGT GTCCAAGTCG
GACTTCGCCA CGTACACGTG GGCGCTGCTT GCGCTGATCG ACGCGGAAAA GCGCGGCGCG
AAGCTCAATG GCACCGTCGA ACTCCATTTC ACCTACGACG AAGAAACCGG CGGCGATATC
GGCCCGAAGT GGCTGCTGGA TCAGGGCTTG AGCAAGCCCG ATTACGCCAT CTCCGCCGGC
TTTGCCTATG GCATCACTTC GGCGCACAAC GGGTGCCTGC ACGTGCAGGT GACGGTGCGC
GGCAAGCAGG CACACGCTGC CATGCCGCAT ACGGGCATCG ACGCCATCGA GGCGGCCACG
CATATCCTGC AAGCCGTGTA TGCCTATCGC GCAGAACTCG CAACGCGCAA ATCAGCCGTG
CCCAGCATCG ACCATGCAAC GCTCAACGTC GGGTTGATCC AGGGCGGCAT CAACACCAAC
GTGGTGCCCG ATCTGGTGAC GTTCCGCGTT GACCGCCGGA TGATTCCTGA AGAAGCCGGG
CGCGATGCAG AAGGCGAACT GCGCGCCGTG ATCGAGCGCG CGGCGGCAGA ACGGCCGGGG
ATCGAGGTTT CAGTCGAACG CATTCTCTTG GCAGAGCCGC TTGCCGAACT GCCGGGCGTG
GACGCGCTGA TTGGCGCGCT GCGACGGAAT GCGCTGGCCG TGTTTGGAGG TGATGTGCCG
GTGCATGGCG TGCCGCTGTA TACCGATGCC CGGCATTACA CGGCGCACGG GGTGCCGACG
GTGCTGTATG GCGCGGGACC GCGTACGTTG ATGGAAGCGC GTGGGCACAA CACGGATGAA
AACCTGCGGT TGAATGATCT GCGAGGCGCG ACTGTGGTGG TGGGGTGCGC TGTGGGGGAG
TTATTGGGCG GGTGA
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| Protein sequence | MTQAQLATPG IDADIRAFVE AAHAQQIEFL RELVKVPSDN PSGDCAPHAV RAKALLEALG
LTVEAHAVPQ AQVRAAGMVS ATNLIVRHTF GNGGPTVAMN AHGDVVPPGL GWTHDPYGGE
TVETEHGPTM FGRGVAVSKS DFATYTWALL ALIDAEKRGA KLNGTVELHF TYDEETGGDI
GPKWLLDQGL SKPDYAISAG FAYGITSAHN GCLHVQVTVR GKQAHAAMPH TGIDAIEAAT
HILQAVYAYR AELATRKSAV PSIDHATLNV GLIQGGINTN VVPDLVTFRV DRRMIPEEAG
RDAEGELRAV IERAAAERPG IEVSVERILL AEPLAELPGV DALIGALRRN ALAVFGGDVP
VHGVPLYTDA RHYTAHGVPT VLYGAGPRTL MEARGHNTDE NLRLNDLRGA TVVVGCAVGE
LLGG
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